Alteromonas australica H 17: EP13_12175
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Entry
EP13_12175 CDS
T03220
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aal
Alteromonas australica H 17
Brite
KEGG Orthology (KO) [BR:
aal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aal03016
]
EP13_12175
Enzymes [BR:
aal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EP13_12175
Transfer RNA biogenesis [BR:
aal03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EP13_12175
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AIF99380
UniProt:
A0A075P334
LinkDB
All DBs
Position
complement(2692946..2694106)
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AA seq
386 aa
AA seq
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MQYQLITTFEQLENVCAIAQTQPAVALDTEFVRTRTLSPHLGLIQLFDGEQLVLIDPIEI
EDLSPFVALMENENVVKVLHSCSEDLETFLSAFDTIPTPVFDTQFAASVLGLGATLGYAK
LVELLCEVSLDKGESRTDWLARPLREAQLSYAANDVLYLLPCYQQLVEKINQAGKLHWVY
QEVELLGQKKRSQMPEDFAYLQIKNNWRLNSEQLTVLQSLAAWRLARAREKDMALNFVFK
ELHLFEAAQLMPTSKAGLSRMHGLSPQSVRRYGETIIALVEEARERYKATPDSLKLPVVK
RLIDVPHYKKMLASLKDTSERIAKDNEVTTEVIASKKQLNQLLKWYWFSTDDTRVLGLKP
EVLSGWRQPLFQPHVEALLGQPPVNP
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatcaactaattactacctttgagcaactagaaaacgtttgtgcaatagcgcaa
actcaacctgctgttgcccttgataccgagtttgttcgtacgcgcaccttgtcaccgcac
ttaggccttattcagttgtttgatggcgaacaactggtgcttatcgatcccatagaaatt
gaagatctttctccttttgtggcactaatggaaaacgaaaatgtggtgaaagtactgcat
tcttgttctgaagatttagaaaccttcttatcagcgtttgataccataccaacccctgtt
tttgatacacagttcgctgctagtgtacttggcttaggtgccacgcttggctatgccaaa
ctggttgaattgctgtgtgaagtcagtttagacaaaggtgagtcgcgcacagactggtta
gcaaggcctctgcgagaagcgcaattgagttacgctgctaacgatgttctttaccttttg
ccttgctatcaacaactcgttgaaaaaataaatcaggcaggtaagttacattgggtatat
caggaagttgaattactggggcagaaaaagcgtagccaaatgccagaagattttgcttat
ctccaaattaagaataactggcgtttaaacagcgaacagctcactgtcttgcaatctctc
gcggcgtggcgacttgctcgcgcacgagaaaaagacatggcgttaaattttgtgtttaaa
gaactgcacctttttgaagccgcgcagttaatgccaaccagtaaagcgggcctatcacgc
atgcatggcttaagccctcaaagtgtaaggcggtatggtgaaacaattatcgccttggtt
gaggaagccagagagcgttacaaggcaacgcctgattctttaaagcttcctgtggttaag
cgcctaatagatgtacctcattacaagaaaatgttagcgtcgttaaaagacacaagtgag
cgtatcgctaaggataatgaggttaccaccgaagtcattgcgtctaaaaaacagctaaat
caattgctaaaatggtactggttttccaccgatgacacccgtgtattgggccttaaacct
gaagtattaagtggttggcgacaacctttgttccagcctcacgttgaagcgctgcttggt
caacctcccgttaacccataa
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