Apteryx mantelli mantelli (North Island brown kiwi): 106492535
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Entry
106492535 CDS
T04298
Symbol
COL9A1
Name
(RefSeq) collagen type IX alpha 1 chain
KO
K08131
collagen type IX alpha
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam04510
Focal adhesion
aam04512
ECM-receptor interaction
aam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106492535 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106492535 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106492535 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aam00535
]
106492535 (COL9A1)
Proteoglycans [BR:
aam00535
]
Extracellular matrix (ECM) proteoglycans
Others
106492535 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
106492535
NCBI-ProteinID:
XP_013807844
UniProt:
A0A8B7JAW8
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Position
Un
AA seq
916 aa
AA seq
DB search
MKSNWKITAFFYVCSFLGSFISATIQQQSRLPVILGSSQRTDLCPTIRIGQDDLPGFDLI
SQFQIEKAASRGIVQRVVGSAALQVAYKLGPNVDFRIPTSALYSNGLPDEYSFLTTFRMT
GATLQKYWTIWQIQDSSGKEQVGVNLDGPTKSVEFSYKGLDGSLQTASFLHLPFLFDSQW
HKLMISVEANSVTLFIDCTKIESLNIKPKGKISMDGFAVLGKLKNNPHISVPFEIQWMVI
HCDPLRPQREGCGELPARISQTEIERGPPGPPGPPGPPGVPGIDGIDGERGPNGPPGPPG
PDGDAGKAGSPGLPGEPGADGLTGPDGSRGATGPKGQKGEPGLPGGRGFPGKGLLGPPGP
AGAAGLPGEVGRAGPPGDPGKRGPPGPPGPPGPQGTIGLQDGDPLCPNACPPGRPGHAGL
MGMKGQKGSKGESGEPGKQGYKGEEGDQGPLGEIGAQGPPGILGIRGITGIMGPKGTKGA
RGLDGDPGPQGLPGAPGDQGQRGTLGEAGPKGERGPQGTKGINGLPGPKGESGLPGVDGR
EGIPGMPGAKGEPGKPSAPGDAGLQGLPGLPGSPGVKGIPGPKGSRGPPGVPGFMGNSGK
PGEQGPEGEAGPTGPRGPPGSRGEPGPVGPPGLPGKRGPQGDIGLPGLSGPPGLPGGKGD
RGSVGEPGPKGEQGVPGPEGDGGEKGDLGDMGLPGAKGSVGNPGEPGSRGPEGSRGLPGM
EGPRGSPGPRGLQGEQGAPGLPGSQGPAGREPTDQHIKQVCMRVMQEQLAQLAASLRRPE
FGAPGLPGLPGPPGAPGPPGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEPGERGERGF
PGRGPKGYPGPRGLPGEPGKPSYGREGRDGERGRPGVAGWPGIPGPPGPPGPPGYCEPVS
CRMQAGQRAGKNMKGP
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaactggaaaattacagctttcttttacgtgtgtagttttctggggtctttc
atctcagctaccatccagcaacaatcaaggctgccagtcattctgggttcaagtcagaga
actgatctctgtccaacaatcaggattggccaagatgacttaccaggctttgacctgatt
tctcagttccaaatagaaaaagctgcttcccgaggaattgtccagagagtagtgggctct
gctgctttacaagtggcttataaactgggacccaatgtagacttcagaatcccaaccagt
gctttgtattccaatggattgcctgacgaatattcctttctaactacttttcgcatgacg
ggggccacacttcagaaatactggactatttggcaaatccaggattcttcaggaaaagaa
caagttggagtgaatcttgatggtccaacaaaaagtgttgaattttcttataaaggactg
gatggaagtctccaaacggcatcatttttgcatttgcctttcttgtttgattcccaatgg
cacaagcttatgataagtgtggaagcaaacagtgtcacactttttattgactgtactaaa
atagaatccttaaacataaaaccaaaggggaaaatcagcatggatggctttgctgtgctt
ggaaaacttaaaaataatcctcacatttcagttccgtttgaaatccagtggatggtgatt
cactgtgacccgcttcgaccccagagagaaggttgtggtgagcttccagccaggataagc
cagacagaaattgagagaggcccccctggtccaccaggccccccaggccccccaggagtt
cccggtattgatggcattgatggagagagaggtcctaatggccccccaggtccaccgggg
ccagatggggacgcaggcaaagcaggatcccctggcctgcccggagagccaggcgctgat
ggacttacaggccctgatggatcacgtggagcaacaggaccaaaaggacagaagggtgag
ccaggactgccaggtggtcgtggatttccaggcaaaggacttcttggaccacctggtcca
gctggtgcagcaggacttcctggtgaagtaggccgtgctggtccacctggagatccggga
aaaagaggaccaccaggaccaccaggaccaccaggtcctcagggaacaattggcctgcaa
gatggtgacccattgtgtcccaatgcttgtccacctggtcgcccaggacatgctggctta
atgggaatgaagggacagaaaggttcaaaaggagagtccggtgaaccaggaaaacaaggc
tataagggtgaagaaggagaccaaggaccccttggtgaaattggagctcaaggccctcca
ggcattctaggtatcagaggtataactggtataatgggacctaaaggcacgaaaggagct
cgtggcctcgatggtgatcctggtccccaaggtcttcctggagcacctggggatcaagga
cagagaggcacactgggagaggcaggtccaaagggagaaaggggtcctcaaggtacaaaa
ggaataaatggtctcccggggcccaaaggagagtctggcttaccaggagttgatggtcgg
gaagggatccctggaatgcctggagcaaagggtgaaccaggaaaacccagtgctccaggt
gatgcagggcttcagggactgccaggtttaccaggctctccaggtgtgaaaggcattcct
ggcccaaagggtagtagaggtccccctggcgtgccaggttttatgggaaattctggtaaa
cctggtgaacaggggccagagggagaagcaggaccaacaggaccccggggaccaccaggt
agcagaggggagccaggtcctgtgggtcctccaggtctgccagggaaacggggtccccag
ggtgatattggacttcccggactgtcaggtcctccaggtttacctggtggtaagggtgac
cggggctcagttggtgaaccaggacctaagggtgaacaaggtgtgcctggaccggaagga
gatggaggagaaaagggagacttaggcgacatgggattaccaggtgcaaagggatctgtt
ggtaatcccggagagcctggttcccgggggcctgaggggagtcgaggactgcctggcatg
gaaggaccacgaggctcacctggaccgcgaggcttgcagggtgaacaaggtgctccaggt
ctgcctggcagccaaggtccagctggaagagaaccaactgatcagcacattaagcaggtt
tgcatgagagtcatgcaagaacaactagctcagctggcagccagtcttaggaggccagaa
tttggcgctccaggtctcccaggcctacctgggccaccaggggctcctgggcctcctggg
gaaaatggcttcccaggacagcttggaccccgtggcttgcctggccttaaagggccccct
ggtgaaatcggtcgtaaaggtcctaaaggtgaaccaggagaaagaggagaaagaggattt
ccaggcagaggaccgaaaggttaccctggaccaagaggtcttccaggtgaaccaggcaaa
cccagctatggcagggaaggccgtgacggcgaacggggccgccctggagtggcaggttgg
cctgggattcctggtcctcctggcccccccggccctccagggtactgtgagccggtgtct
tgccgaatgcaggctggacagagagctgggaaaaacatgaaagggccgtga
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