KEGG   Anoxybacillus amylolyticus: GFC30_577
Entry
GFC30_577         CDS       T04397                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
aamy  Anoxybacillus amylolyticus
Pathway
aamy02020  Two-component system
aamy02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:aamy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GFC30_577 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    GFC30_577 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aamy03021]
    GFC30_577 (rpoN)
Transcription machinery [BR:aamy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GFC30_577 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_17 Sigma70_r4 HTH_23 MarR_2 HTH_Tnp_ISL3 Sigma70_r4_2 Xre-like-HTH HTH_24 HTH_3 HTH_26 Death Fe_dep_repress HTH_IclR HTH_38 TrmB GerE UBN_AB
Other DBs
NCBI-ProteinID: ANB59590
UniProt: A0A167T7V7
LinkDB
Position
569006..570301
AA seq 431 aa
MRAELLQEQRLKLALTKELAQAIELLQYSALELRSILYEQSLENPFLEIKEGKPIRPPKR
TMGKQARDWMENISKPSDTLATHLAAQLHTMSLPSRTRKVLDYLIASLDEDGYLRIDMGD
TAAFLAISEAELEDAVLLLQSLEPAGVGARSLQECLLLQLKRLPVRNELAEKVIAEHFPA
FVEKTWKALAKQLGIDVYDLQQIWDFIRTLEPRPGSYYTAADPQFIIPDIIVERCGEDVS
VWLNNEFLPEVRWNYAYEKKMEIHCDEQAEIFIKEKYRQFTWLTKSLEHRKQTLLAVAKE
VMERQKQCLTAGLAALKPLTMREVAEVLDIHESTVSRAVKNKYVQMPFGTVELRRFFASS
LSSMSEEEASAAKTKALITHLIEAENKHNPLSDQAIASLLGETYGIAISRRTVAKYREQM
HIPSSAKRKRY
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgagggctgaattgttgcaagaacaacgtttaaagcttgccttaacaaaagagttggcg
caagccattgaattgcttcaatattctgcgctcgaactgcgctcgattttatatgaacag
tcattggaaaacccgtttctagaaataaaagaaggaaaaccgattcgtccgcctaaacgg
acaatgggaaaacaagcacgagattggatggaaaacatcagcaaaccgtctgacacgtta
gcaacgcatttagcggctcagctacatacgatgtcgttgccctcacgaacacgaaaagtg
ctcgactatttaatcgcctcccttgacgaagatggatatttacgcattgatatgggcgac
actgccgctttcttagcgatttcagaagcggaattagaagacgccgtgctgctattgcaa
tcacttgaaccggcaggggtaggtgcaaggtcactgcaggaatgtttgttgctgcagctc
aagcgactacctgtccgaaacgagttggcagaaaaagtgattgccgagcactttcccgcg
tttgtcgaaaaaacgtggaaggcattggcgaaacagttaggtattgacgtatatgacctg
cagcaaatatgggactttattcgcacgcttgaacctcgtccaggcagctattatacagcg
gctgatccacagtttatcataccggacattatcgtcgagcggtgtggggaagatgtttcc
gtctggctgaacaatgagtttcttccagaagttcgttggaattatgcctatgagaaaaaa
atggaaattcattgtgatgaacaagcagaaatatttataaaagaaaaatatcgccaattt
acgtggctaacgaaaagtttggaacatcgcaaacaaacgcttctagccgtggcaaaagaa
gtaatggaacgtcaaaagcaatgtttgaccgctggattggcagcgttaaaaccgttgacg
atgcgggaagtggctgaggtactggacattcacgaatcgactgtcagccgtgcagttaaa
aacaaatatgtacaaatgccgtttggaacggtcgagttgcgccgtttctttgcaagttcc
ctctcatcgatgagtgaggaagaagcatcggcggcaaaaacgaaagcgcttattacgcac
ttaattgaggcagaaaacaaacataatccgctctccgaccaagccattgccagtttatta
ggagaaacgtatggcattgctatctcgcggcgaacggtggcgaaatatcgcgaacaaatg
cacatcccttcatcagcgaaacgaaaacggtattag

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