Anoxybacillus amylolyticus: GFC30_577
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Entry
GFC30_577 CDS
T04397
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
aamy
Anoxybacillus amylolyticus
Pathway
aamy02020
Two-component system
aamy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aamy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GFC30_577 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GFC30_577 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamy03021
]
GFC30_577 (rpoN)
Transcription machinery [BR:
aamy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GFC30_577 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_17
Sigma70_r4
HTH_23
MarR_2
HTH_Tnp_ISL3
Sigma70_r4_2
Xre-like-HTH
HTH_24
HTH_3
HTH_26
Death
Fe_dep_repress
HTH_IclR
HTH_38
TrmB
GerE
UBN_AB
Motif
Other DBs
NCBI-ProteinID:
ANB59590
UniProt:
A0A167T7V7
LinkDB
All DBs
Position
569006..570301
Genome browser
AA seq
431 aa
AA seq
DB search
MRAELLQEQRLKLALTKELAQAIELLQYSALELRSILYEQSLENPFLEIKEGKPIRPPKR
TMGKQARDWMENISKPSDTLATHLAAQLHTMSLPSRTRKVLDYLIASLDEDGYLRIDMGD
TAAFLAISEAELEDAVLLLQSLEPAGVGARSLQECLLLQLKRLPVRNELAEKVIAEHFPA
FVEKTWKALAKQLGIDVYDLQQIWDFIRTLEPRPGSYYTAADPQFIIPDIIVERCGEDVS
VWLNNEFLPEVRWNYAYEKKMEIHCDEQAEIFIKEKYRQFTWLTKSLEHRKQTLLAVAKE
VMERQKQCLTAGLAALKPLTMREVAEVLDIHESTVSRAVKNKYVQMPFGTVELRRFFASS
LSSMSEEEASAAKTKALITHLIEAENKHNPLSDQAIASLLGETYGIAISRRTVAKYREQM
HIPSSAKRKRY
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagggctgaattgttgcaagaacaacgtttaaagcttgccttaacaaaagagttggcg
caagccattgaattgcttcaatattctgcgctcgaactgcgctcgattttatatgaacag
tcattggaaaacccgtttctagaaataaaagaaggaaaaccgattcgtccgcctaaacgg
acaatgggaaaacaagcacgagattggatggaaaacatcagcaaaccgtctgacacgtta
gcaacgcatttagcggctcagctacatacgatgtcgttgccctcacgaacacgaaaagtg
ctcgactatttaatcgcctcccttgacgaagatggatatttacgcattgatatgggcgac
actgccgctttcttagcgatttcagaagcggaattagaagacgccgtgctgctattgcaa
tcacttgaaccggcaggggtaggtgcaaggtcactgcaggaatgtttgttgctgcagctc
aagcgactacctgtccgaaacgagttggcagaaaaagtgattgccgagcactttcccgcg
tttgtcgaaaaaacgtggaaggcattggcgaaacagttaggtattgacgtatatgacctg
cagcaaatatgggactttattcgcacgcttgaacctcgtccaggcagctattatacagcg
gctgatccacagtttatcataccggacattatcgtcgagcggtgtggggaagatgtttcc
gtctggctgaacaatgagtttcttccagaagttcgttggaattatgcctatgagaaaaaa
atggaaattcattgtgatgaacaagcagaaatatttataaaagaaaaatatcgccaattt
acgtggctaacgaaaagtttggaacatcgcaaacaaacgcttctagccgtggcaaaagaa
gtaatggaacgtcaaaagcaatgtttgaccgctggattggcagcgttaaaaccgttgacg
atgcgggaagtggctgaggtactggacattcacgaatcgactgtcagccgtgcagttaaa
aacaaatatgtacaaatgccgtttggaacggtcgagttgcgccgtttctttgcaagttcc
ctctcatcgatgagtgaggaagaagcatcggcggcaaaaacgaaagcgcttattacgcac
ttaattgaggcagaaaacaaacataatccgctctccgaccaagccattgccagtttatta
ggagaaacgtatggcattgctatctcgcggcgaacggtggcgaaatatcgcgaacaaatg
cacatcccttcatcagcgaaacgaaaacggtattag
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