KEGG   Aggregatibacter aphrophilus NJ8700: NT05HA_0378Help
Entry
NT05HA_0378       CDS       T00929                                 

Definition
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
aap  Aggregatibacter aphrophilus NJ8700
Brite
KEGG Orthology (KO) [BR:aap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:aap03016]
    NT05HA_0378
Enzymes [BR:aap01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     NT05HA_0378
Transfer RNA biogenesis [BR:aap03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    NT05HA_0378
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: RNB OB_RNB S1 CSD2 DUF2274
Motif
Other DBs
NCBI-ProteinID: ACS96805
LinkDB All DBs
Position
complement(388010..389989)
Genome map
AA seq 659 aa AA seqDB search
MFQDNPLLAQLKQQIHDSKERVEGIVKSTDKAYGFLECDKKSYFISPVAMKKVMHGDKIS
ATIEKQGDKEQAEPEALIEPMLTRFIAKVRFNKDKKLQVLVDHPNINQPIGAAQSKAVKE
ELQEGDWVVATLKTHPLRDDRFFYAQITQFICHADDELAPWWVTLARHEQPREPVQGQEH
YEMQDQETRENLTALHFVTIDSETTQDMDDALYIEPIASNGEQTGWQLVVAIADPTAYIS
LNSQIEKDAKQRCFTNYLPGFNIPMLPRELSDELCSLKPHETRPALVCYIQTDLQGNISA
PAKFVLADVQSKDKLTYNQVSDYLEGKDNAWQPENPETAQQIQRLHQFTLTRTQWRKTHA
LLFKEKPDYSFVLAENGKVQEIKAEYRRIANQIVEESMIIANICAAQFLHENLQCGIFNT
HSGFDKKFLENAHNFLLANLANDENKADLQTRYALENLATLNGYCQMRHDIEPIEGDYLE
FRLRRFLTFAEFKAELAPHFGLGLKGYATWTSPIRKYSDMVNHRLIKAHLANRDFAKPEE
RVLARLQEARRQNRLVERDIADWLYCRYLADKVESKVEFEAEVQDVTRGGLRVMLLENGA
SMFIPASTLHDNREEITINNDEIAFYIKDQRQYKIGDLIRVQLNEVKENTRSIVGTILK
NT seq 1980 nt NT seq  +upstreamnt  +downstreamnt
atgttccaagataatccattactcgcacaactcaaacaacaaattcacgatagtaaagaa
cgcgtagaaggcatagtaaaaagcaccgataaggcttatggctttttggaatgcgacaaa
aaaagctatttcatctcccctgtcgctatgaaaaaagtgatgcacggcgacaaaatcagt
gccactatcgaaaaacaaggcgataaagaacaagcggaaccggaagccttaatcgagccg
atgcttacccgttttatcgctaaagtgcggttcaataaagacaagaaattgcaggtgctt
gttgatcaccctaacatcaatcagcccattggcgctgcgcaaagcaaagccgtcaaagaa
gaattacaggaaggcgattgggttgtggcaaccttaaaaacccaccctttgcgcgacgat
cgttttttctatgcgcaaatcactcaatttatttgccacgccgatgatgaactggcacct
tggtgggtgacccttgcgcgtcacgaacaaccgcgtgaaccggtacaaggacaagagcac
tatgaaatgcaggatcaagaaacacgcgaaaatctgaccgcacttcacttcgtcaccatc
gactctgaaaccacgcaggacatggacgacgccttatatattgagcctattgcctcaaac
ggtgaacaaaccggctggcaattagtggtggccattgccgacccaacggcttacatcagt
ttaaattcacaaatcgaaaaagacgccaaacaacgttgtttcaccaattatctgcccggc
ttcaatattccgatgttgccacgggaactttccgatgagctttgttccttaaaacctcac
gaaacccgtcctgcattggtttgctacattcaaacggacttgcagggcaacatcagtgca
ccggcaaaatttgtgttagccgatgtgcaatcaaaagataaattgacgtacaaccaagtt
tccgattacttagaaggcaaagacaatgcttggcagccggaaaatccggaaacggcacag
caaattcagcggttgcatcaatttaccctaaccagaacgcaatggcgcaaaacccacgca
ctgctttttaaagaaaaaccggattattctttcgtgctggcagaaaatggcaaagtgcaa
gaaattaaggcggagtatcgccgtattgccaaccaaatcgtggaagaatccatgattatc
gcgaatatctgcgccgcccaatttctacatgaaaacttacagtgcggcatttttaacacg
cacagcggatttgataaaaaattcttggaaaacgcccacaatttcttgttagccaattta
gccaatgatgaaaacaaagcagacttacaaacccgttatgcgctagaaaatcttgcaacc
ttaaacggctattgccaaatgcgccatgatatagaaccgattgaaggggattatttggaa
ttccgtttacgtcgttttctcactttcgcagaatttaaagcggaattggcaccacacttt
ggcctaggcttaaagggctacgccacgtggacatcgccaatccgcaaatattccgatatg
gtgaaccatcgcttaatcaaagcccatttagccaaccgcgattttgccaaacctgaagaa
agggtacttgcccgcttgcaagaagcacgtcgccaaaatcgtttagtggaacgtgatatt
gccgattggctatattgtcgttatttggcggataaggtggaaagcaaagtcgaatttgaa
gccgaagtgcaagatgtcacccgcggcggcttgcgtgtcatgctgttggaaaacggtgcc
tccatgtttatcccggcctccacactccatgacaaccgagaggaaatcaccataaataat
gatgaaatagccttctacattaaagatcagcgccaatataaaatcggcgatcttatccgt
gtgcaactgaacgaagtaaaagaaaacacacgaagtatcgtaggaaccatcttaaaataa

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