KEGG   Aggregatibacter aphrophilus NJ8700: NT05HA_1057Help
Entry
NT05HA_1057       CDS       T00929                                 

Definition
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
aap  Aggregatibacter aphrophilus NJ8700
Brite
KEGG Orthology (KO) [BR:aap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:aap03016]
    NT05HA_1057
Enzymes [BR:aap01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     NT05HA_1057
Transfer RNA biogenesis [BR:aap03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    NT05HA_1057
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_pol_A_exo1 HRDC
Motif
Other DBs
NCBI-ProteinID: ACS97425
LinkDB All DBs
Position
complement(1068456..1069613)
Genome map
AA seq 385 aa AA seqDB search
MTYQIKECKNAPHFKLITEDESLAEVCALAGQQSAVALDTEFVRTRTFYPKLGLIQLYAG
DEVALIDPTTIQDFSPFIALLADERVTKVLHASGEDLEVFQHYFQQLPQPMCDTQVVANF
LGFANSPGFATLVKHYFQIEIDKGASCTDWLARPLSDTQLQYAAADVWYLLPLYQQMKAQ
LAQTEWQSAVENECEFLLNKRAQYARDPEEAYFAIPNAWKLNSLELMRLKLLAKWRMQEA
MRRDLTLNFVVHAENLWTVAKHDPKSTSALLDLGLSTAEVRIHGKKLLQLLEQVKRIDPK
DYPPMIQRLMDDPRYKAALKTLQQELTKITPENLPKELIAGRRGLESLMKWHWRKEADNE
PPELLNGWRRPFGEKLLNALKAFDA
NT seq 1158 nt NT seq  +upstreamnt  +downstreamnt
atgacgtatcaaataaaagaatgcaaaaatgcaccgcactttaagctcattactgaggat
gaatccttggcagaggtttgtgcattggccggacagcaaagtgcggtggctttagacacc
gaatttgtccgcacccgaactttttatccgaagctcggtttgattcagctctatgccggt
gatgaagtcgcgcttatcgatccgacaacgattcaagatttttctcctttcattgcctta
cttgccgatgaacgcgtcaccaaagtgctacatgccagtggagaagatttggaagttttt
caacattatttccagcaattgccgcaaccaatgtgtgatacccaagtggtggctaatttt
ctgggctttgccaattcaccgggatttgccacattggtgaaacattatttccaaattgaa
attgataaaggcgcttcctgtaccgattggttggctcgcccgttatccgatacgcaattg
caatatgcggcagccgatgtgtggtatttgttgccgttatatcagcaaatgaaagcacag
ctggcgcaaaccgagtggcaaagtgcggtggaaaatgaatgtgaatttttactcaataaa
cgggcgcagtatgcaagggatccggaggaagcgtattttgctattcccaatgcgtggaaa
ctcaattcattagaattaatgcgcctaaaactgttggcaaaatggcgtatgcaagaagcc
atgcgacgggatctcactttaaattttgtggttcatgcggaaaatttatggacggtagca
aaacatgatccgaaaagtacctcggcgttgttggatcttgggttaagtacggcagaagtg
cgaattcacggtaaaaaattattacagttgcttgaacaggttaaacgaattgatccgaag
gattatccgccaatgattcaacgtctaatggatgacccgcgttataaagcggcattaaaa
accttgcaacaggaattaacgaaaattacgcctgaaaatttaccaaaagagttaattgca
ggccgacgcggcttggaaagtttaatgaaatggcactggcgaaaagaagcggataacgaa
ccgccggaattgttaaacggttggcgccgaccttttggtgaaaaacttttgaacgccttg
aaagcgttcgacgcataa

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