Arcobacter aquimarinus: AAQM_1174
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Entry
AAQM_1174 CDS
T06604
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
aaqi
Arcobacter aquimarinus
Brite
KEGG Orthology (KO) [BR:
aaqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaqi03032
]
AAQM_1174 (hup)
03036 Chromosome and associated proteins [BR:
aaqi03036
]
AAQM_1174 (hup)
03400 DNA repair and recombination proteins [BR:
aaqi03400
]
AAQM_1174 (hup)
DNA replication proteins [BR:
aaqi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AAQM_1174 (hup)
Chromosome and associated proteins [BR:
aaqi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AAQM_1174 (hup)
DNA repair and recombination proteins [BR:
aaqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AAQM_1174 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QKE25926
LinkDB
All DBs
Position
complement(1190425..1190703)
Genome browser
AA seq
92 aa
AA seq
DB search
MNKAEFIDAVAAKAGLSKKDAKGAVDAVLDTITEALVKKESVSFIGFGTFAVSERAARTA
KVPGTDKTVDVPATTVAKFKVGKALKEAVSGK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagaatttattgatgcagtagctgcaaaagctggtttatctaaaaaagat
gcaaaaggtgcagttgatgcagttttagacacaattactgaggctttagttaaaaaagag
tctgtaagttttatcggatttggtacattcgctgttagcgaaagagctgcaagaactgca
aaagttccaggaacagataaaactgttgatgttccagctactactgttgctaaattcaaa
gttggaaaagctctaaaagaagctgtttctggtaaatag
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