Alcaligenes aquatilis: D3M96_09045
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Entry
D3M96_09045 CDS
T05678
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aaqu
Alcaligenes aquatilis
Pathway
aaqu03410
Base excision repair
aaqu03430
Mismatch repair
aaqu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D3M96_09045 (recJ)
03430 Mismatch repair
D3M96_09045 (recJ)
03440 Homologous recombination
D3M96_09045 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaqu03400
]
D3M96_09045 (recJ)
DNA repair and recombination proteins [BR:
aaqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
D3M96_09045 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D3M96_09045 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D3M96_09045 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
VRP3
Cwf_Cwc_15
Motif
Other DBs
NCBI-ProteinID:
AYN20656
UniProt:
A0A3G2HU26
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All DBs
Position
complement(1991101..1992810)
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AA seq
569 aa
AA seq
DB search
MVTPILKNRPAQEAASQALKQAGIHDLMARLLASRGVTDAAQIDPAWRNMIPPNMLTQAR
EAAVLLADAIARRDRMLIIADYDCDGATACAVGLRALRSMGAVVDFLVPNRFETGYGLSP
AVVELAEQHPSGKPDLLITVDNGIASIDGVEAAHMAGMKVLVTDHHLPGDELPDALAIVN
PNQPGCEFPSKNLAGVGVIFYLMLALRAELRQRGVYEANAGPRLNELADLVALGTVADVV
SLDANNRLIVTQGLERMRKGQMQAGLRALFQVAGRDPRQASAFDLGFALGPRINAAGRLA
DMALGIRCLITDDEDEAANLARELEEMNQDRRSIEQSMREEALRAAELAEPDTSATVCVF
HPEWHQGIVGLVASRLKEKYWRPTLAFAQGDEGEIKGSGRSIPDVHLRDALDLVSKRYPG
LILKFGGHAMAAGLTIEEDNYDVFVQAFEEAVQELTGRFQFDPIIETDGSLEPEHINITV
AGILQKQVWGAGFPAPVFRDRFFVRQQRLLKNKHLKLSLERNGEYFDAIWFNRDTLLPEH
IEAAYRLDQNEWNGNVSVQFIIEFAQGQD
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
gtggtcacccctatcctgaaaaaccgtcccgcccaagaagccgccagccaagccctgaag
caggccgggattcacgatttaatggcccgcttgctggcctctcggggtgtgaccgatgcc
gcccagatcgatccggcctggcgcaacatgattccgcccaatatgctgacccaggcgcgt
gaagcggccgtcttgctggccgatgccattgcccgtcgggatcgcatgctgatcattgcc
gactacgactgtgacggcgctaccgcctgtgccgtgggcctgcgtgcgctacgcagcatg
ggcgctgtcgtggactttctggtgccaaaccgctttgaaaccggctatggcttatcaccc
gccgtggtggaactggctgagcaacacccctcgggcaagccagatctgctgattacggtg
gataacggcattgccagtattgatggcgtggaagccgcccatatggcgggtatgaaagtt
ctggtcacagaccatcacttgccgggtgatgaattgcccgatgctctggcgattgtgaac
cccaatcagcccggctgtgaattcccctccaagaacctggccggtgtgggcgttattttt
tacctgatgctggctttgcgtgccgagctgcgccagcgtggagtgtatgaagccaacgcc
ggcccacgcctgaacgagctggctgatctggtcgccctgggtactgtggccgacgtggtc
agcctggatgccaacaaccgcctgatcgtcactcaagggctggagcgcatgcgcaagggc
cagatgcaagccggactgcgcgccctgttccaggttgcaggccgcgatccgcgtcaggcc
agtgcctttgatctgggttttgccttgggcccacgcatcaacgccgctggtcgactggcc
gatatggccttgggcatacgctgcctgatcacggacgacgaggatgaagccgccaatctg
gcccgcgaactggaagaaatgaaccaggatcgccgctcgattgagcagtccatgcgcgaa
gaggcgctacgcgcggccgagctggctgaaccggacaccagtgccacggtgtgcgtgttt
cacccggaatggcaccaaggcatcgtcggactggtcgcctcacgtctgaaagagaagtat
tggcgccctaccctggcctttgcccaaggtgacgaaggcgagatcaaaggttcgggccgt
tctattcccgacgtgcacctgcgcgatgcgctggacttggtctccaaacgctatcccggt
ctgattctgaagtttggtggtcacgccatggcagccggcctgaccattgaagaggacaat
tacgatgtattcgtacaggcttttgaagaagcggtgcaggagctgacaggccgctttcaa
tttgaccccatcatcgaaaccgacggttcactggaacccgaacacatcaatattacggtg
gcgggaatactgcaaaaacaagtctggggcgcaggttttccagcgccagtattccgtgac
cggttctttgtgcgccagcagcgcctgctgaaaaacaagcatttgaaactgagcctggag
cgtaacggcgaatacttcgatgccatttggttcaatcgcgataccttgctgcccgagcat
atcgaggcggcttatcgcctggatcagaacgaatggaatggaaacgtcagcgtgcaattc
attattgaatttgcacagggacaagactag
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