Amedibacterium intestinale JCM 30884: Aargi30884_03830
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Entry
Aargi30884_03830 CDS
T06426
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
aarg
Amedibacterium intestinale JCM 30884
Pathway
aarg03030
DNA replication
aarg03430
Mismatch repair
aarg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Aargi30884_03830 (holA)
03430 Mismatch repair
Aargi30884_03830 (holA)
03440 Homologous recombination
Aargi30884_03830 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aarg03032
]
Aargi30884_03830 (holA)
03400 DNA repair and recombination proteins [BR:
aarg03400
]
Aargi30884_03830 (holA)
Enzymes [BR:
aarg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Aargi30884_03830 (holA)
DNA replication proteins [BR:
aarg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Aargi30884_03830 (holA)
DNA repair and recombination proteins [BR:
aarg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Aargi30884_03830 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
IFT57
HTH_37
Motif
Other DBs
NCBI-ProteinID:
BBK21480
UniProt:
A0A6N4TEV4
LinkDB
All DBs
Position
384326..385270
Genome browser
AA seq
314 aa
AA seq
DB search
MNYVLYGEEQYRLKRTLETIVKEYLPDENDLNLIRYDAMHTDIAAIIEDAMTVPFFSSYK
VIIVDHANFLSTLNNTACDIKSLESYLQNPCDSTVLIFTGDFAKLDTRKKVVKTIKKTWK
VLEFKKLDELGKNSVVNEEIQKRKLNITGNAKQILLKRLPLDMETIQKEMDKLELYQGVL
DENVVSSLINRPLEEDVFQLVDAVVEKNKGKAFHIWQDLCVSNTDAIYLIALLAGQFRFL
FEVKNLMVKGYEKDEIAHALNAHPYRVKLSMEKARSLSIKSLMAMLDKLASLDQKLKSGL
LDKKLGFEMFLLEL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaattatgtgttgtatggagaggaacaatatcgtttaaaaaggactttggaaacgata
gtaaaagaataccttccggatgaaaatgatttgaatttaattcgttatgatgcaatgcat
acagatatagcagcgattatagaagatgctatgacagtgccttttttttcttcgtacaaa
gttatcatcgttgatcatgctaattttttgtcgaccttaaataatacagcatgtgacata
aaaagtttagagtcatatcttcaaaatccatgcgatagtacagttcttatttttacaggt
gactttgcaaagctagacactcgcaaaaaagttgtaaaaacaataaaaaaaacgtggaag
gttttagaatttaaaaagttagatgagcttggtaaaaatagtgttgtaaatgaagaaata
cagaaaagaaaactgaatattacaggaaacgcgaaacaaattctattaaaacggttacca
ttggatatggaaacgatacaaaaggaaatggataaactggaactttatcagggggttctc
gatgaaaatgtagtttcatctcttattaatagaccgttagaagaagatgtatttcaactt
gttgatgctgttgtagaaaaaaacaaaggaaaagcttttcatatatggcaggatttatgt
gtctcaaatacagatgcaatttatttgattgctcttttggcgggacagtttcggtttttg
tttgaagtcaagaatcttatggtaaaagggtatgaaaaagatgaaatagctcatgctttg
aatgcccatccatatcgtgtgaaactttccatggagaaagctagaagcttatctatcaag
tcattgatggctatgcttgataagcttgctagtttagatcagaaattaaaaagcggatta
ctggataaaaaacttgggtttgaaatgtttttattggagttatag
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