Acetobacter ascendens: A4S02_13500
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Entry
A4S02_13500 CDS
T05523
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
aasc
Acetobacter ascendens
Pathway
aasc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aasc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4S02_13500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aasc03019
]
A4S02_13500
03009 Ribosome biogenesis [BR:
aasc03009
]
A4S02_13500
Messenger RNA biogenesis [BR:
aasc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A4S02_13500
Ribosome biogenesis [BR:
aasc03009
]
Prokaryotic type
rRNA helicases
A4S02_13500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AOW47627
UniProt:
A0A1D8QZ71
LinkDB
All DBs
Position
complement(2765827..2767584)
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AA seq
585 aa
AA seq
DB search
MPFQNAPAPLARALAARGFTAPTAVQAAVLADDAKNRDLLVSARTGSGKTVAFGLTLADL
LLNDAGRCVPSGAPIALVIAPTRELALQVRSELEWLYAETGARIVSCVGGMEPRKEARAL
ASGCHIVVGTPGRLCDHLRRGALDLSHLKAVVLDEADEMLDLGFRDELETLLDAMPKERR
TLLFSATIARDIAALARRYQQDALRIDTVGTNTPHADITYRAVLTEQGDMAGTVVNVLRL
MESSAAIVFCHTREAVRQLQAILTERGFSSVAISGDLGQNERSRAIESLRHGQARVCVAT
DVAARGIDIPDLGLVIHASLPSNPATLLHRSGRTGRAGKKGTCVLLVPPARRRLAERLLQ
AAKVTAEWSGAPTPAAIATADAERLLGAPFLSAPAPEDAETQTLIGRLAAEHTPEQLAAA
LVGLWHKSLPAPVSVRVITPDARRAAPRERDPNRPVRERERAPAMDGKWFRLSVGREDRA
DPKWLVPMLCRLGNIKKQDIGSIRITQDHTLVEISPDKAEQFASCASATDPDEITVEPAA
APRKGGGGGGPRPAYADRKPKGGRSFAPRREGASKNNSSRKRKPK
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgccttttcagaatgctcctgcccctctcgctcgtgctcttgctgcacgtggctttact
gctcctaccgctgttcaggccgccgttctggccgatgatgccaaaaatcgcgacctgctg
gtttcagcccgcaccggatctggcaaaactgttgctttcggcctgacgctggctgacctg
ctcctgaatgatgcaggccgctgcgtgccatctggcgcacctatcgctctggtaattgcc
cccacgcgtgaacttgccttgcaggtacgcagtgagctggaatggctgtatgccgaaacc
ggcgcgcgcattgtttcctgcgttggtggcatggaaccccgcaaggaagcccgcgccctt
gcctctggctgccacattgttgtgggtacgccgggccgtctgtgtgaccatttgcgccgc
ggtgcgcttgatctttcacacctgaaagccgtggtgctggatgaagcagatgaaatgctt
gatctgggcttccgtgatgagctggaaaccctgctggacgccatgcccaaagagcggcgc
accctgctgttttccgcaaccattgcacgtgacattgcagcccttgcacgccgctatcag
caggatgccctgcgcattgatacggtagggacaaacaccccccatgccgatattacctac
cgcgctgttctgacagaacaaggcgatatggctggcacggttgtaaacgtgctgcggctg
atggaatcctctgctgctattgttttctgccatacgcgtgaagctgtgcgccagttgcag
gcgattctgacagaacgcggtttttcctccgtcgccatttcaggtgatctggggcaaaac
gaacgtagccgcgccatagaaagcctgcgccacggccaagcccgtgtgtgtgtggcaaca
gacgtggccgcccgcggtattgatattccggatctggggctggttatccatgccagccta
ccttccaacccagccactttgctgcatcgttccggtcgtacgggccgtgcgggcaaaaaa
ggcacctgtgtgctgctggtaccgcccgcacgcagaagattggcagaacggctgcttcag
gctgccaaggtaaccgcagaatggagtggtgcccctactccggcagctattgccacagca
gatgctgagcgccttttaggtgcaccattcctttctgcaccagcaccagaagatgcagaa
acacaaacgctgattggtcgccttgccgccgaacatacgccagaacaactggctgcggct
cttgttggcctatggcataaaagcctgccggctcctgtttccgtgcgagttattacacca
gatgcgcgccgcgctgccccgcgtgagcgtgaccccaaccgccctgtgcgcgaaagagaa
cgcgcacctgcgatggatggcaaatggttccgcctttctgttggtcgtgaagatcgggca
gaccccaaatggctggtacccatgctgtgccgcttggggaacattaaaaagcaagatatc
ggctctatccgcatcacgcaggaccatactctggttgaaatttcccccgataaagccgag
cagtttgcgtcttgcgcctctgcaacggacccggatgaaattacagtggaacctgcagcc
gcaccccgcaaaggcggcggcggtggtggacctcgcccggcctatgctgaccggaaacca
aaaggtggccgttcttttgcaccacgccgggaaggcgctagcaaaaacaattcttcccgt
aagcgtaaaccaaaataa
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