Aggregatibacter actinomycetemcomitans D11S-1: D11S_1425
Help
Entry
D11S_1425 CDS
T00993
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
aat
Aggregatibacter actinomycetemcomitans D11S-1
Pathway
aat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D11S_1425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aat03400
]
D11S_1425
Enzymes [BR:
aat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D11S_1425
DNA repair and recombination proteins [BR:
aat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D11S_1425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
ResIII
AAA_25
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACX82807
LinkDB
All DBs
Position
complement(1350581..1354246)
Genome browser
AA seq
1221 aa
AA seq
DB search
MQPLNPISIPLNAISLIEASAGTGKTYTMGSLYLRLLLQAGENAFPHVLNVEQILVVTFT
EMATEELKRKIRERIYDAKQKLTAYQQTQDSAVFEQDEFLRQLADSITDFPLAIQRLTLA
EQNMDLAAIYTIHGFCRRMLMQYAFNSGIHFNLELSGEEDELLLHLAQKLWRAHFYSQPY
AVSEFIQKHLISPANVIHNIKKFAGTELKLPQNRPHFFDGTLPDFLAKLTDYSQQFAAQT
AEVKKHWLENEADIAQLLETEVNTKYKSAKEQKLNRRSFTSTTRLKWLAMMKAWAESDKA
DFPGCFSRFGQTAMNEQKGEEAKDALMHWLFVEIDELLQLAEQQELLSQALWFHYLQMLN
TQLVEYKLNHSEKSFNDLLRLLKEALYHPDNTEFARLIRYQFPFAMIDEFQDTDAVQYQI
FSKIYVEQPQTDAQSDSGFIMIGDPKQAIYKFRGADIFTYFQAARQAQHRFNLAKNYRSH
QHVVDCVNRLFDFSEQPPFLYKDIQFMPVSARTDHPQFWLSGQPEPAVRFYVDEASVKEN
IAKACAVSIQYWLQSAVENSAVFRLDDGDKKTLKPESIAVLVRSRKEAELVKNELRHLGI
ASVYLSEDSNVFDSSAAKDLLMILTACLNPFYERHILNAIATAIFAQTSADIQRIRMDET
RWEHWVEKFIHYQRTWQKQGVLVMLHQLFQQEKITEKLYPTVDGKRLVTDLLHLAELLQE
AATLNESEAALLRWFEKQIQGENRQKEQQVRLESELRLVKIVTIHKSKGLEYDLVWLPFI
GYASTFRGDRITTYYDETQGAVLWDYDKSHEALVQQEDFAEQLRLLYVALTRAKYQLVIG
VPQTFETKWSSLLYVLTHGAIQTREKPNAYDSLPLLEKLVARAPQGSVQIANTADLIPLQ
LQAHAEAQIPLHAAKFTGNIEQNWTVTSFSAIEAIHQNKAYFKAQQMAESAVDFPSVFDL
GKDYDFNEQGQSTESIRETAADESAYPFGYSPFDFPHGINIGTALHRFLEKTDFDRPLNE
DKIQKLCQWLQLEETWLPSLQQWINAILHTPLSTQDSTLQLVNLTRQHCVKEMQFYLKLN
QTFDVTAFNQTLQQHHHLPSEPLQFEAIKGMLRGFMDLVFYHNEKYYLADYKSNFLGVEA
QNYVGTSLQQAMLTNHYDWQYLFYTLALHRYLQQRDANYDYDTHFGGVFYCFLRGMNGEN
QNGVFFDKPDYALIQALENLF
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccactcaatccgatttccattccgttaaatgccatcagccttattgaagcctct
gcagggacgggcaaaacctacaccatgggttctctttatttgcgtctgttattgcaggcg
ggggaaaatgcctttcctcatgtgttaaatgtggagcaaattttagtggtgacttttacc
gaaatggcaacggaggaactgaaacgcaaaattcgtgaacggatttatgatgccaaacaa
aaattgacggcgtatcaacaaacacaggattcggcggtgtttgaacaagatgaattttta
cgccaattagccgacagcatcacggatttccctcttgccattcagcgcctgactttggcg
gaacaaaacatggatttggcggcgatttataccattcatggattttgccgtcgaatgctc
atgcaatatgcgtttaattcgggcattcatttcaacttggaattaagcggtgaagaagac
gaattgttgctgcatttggcgcaaaaactgtggcgggcacatttctattcacagccttat
gccgtttccgagtttattcaaaaacacctgatttcaccggcaaacgtcattcacaatatc
aaaaagtttgccggtacggaattaaaactcccacaaaatcgaccgcacttttttgacggc
acactgcctgactttctcgccaaacttaccgattattcgcaacaatttgccgcacaaact
gcggaagtgaaaaagcactggttggaaaacgaagcggacattgcgcaattgcttgaaacg
gaagtaaacaccaaatataaaagcgcaaaagaacaaaaattaaaccgacgcagtttcacc
tccacaacccgtctgaaatggcttgccatgatgaaagcctgggcagaaagcgataaagcg
gattttccgggctgtttttcccgtttcgggcaaacggcgatgaatgagcaaaaaggcgaa
gaagcaaaagacgctttgatgcattggctttttgttgaaattgatgaactactgcaactc
gccgagcaacaagagctattatcccaagccttgtggttccattatttacaaatgctgaat
acgcagctggtggaatacaaactcaaccatagcgaaaaaagttttaacgatttgttacgt
ttgctgaaagaagccttgtatcacccggataatacggaatttgcccgcctgattcgttac
caatttccttttgccatgattgatgagtttcaggacacggacgcggtgcagtatcagatt
ttttctaaaatttatgtagaacaacctcagacagacgctcaatctgatagcggttttatt
atgattggcgacccgaaacaggcgatttataaattccgtggcgccgacatttttacttat
ttccaagccgcccgccaagcgcaacatcgttttaatctggcgaaaaattaccgctcccat
caacacgttgtggactgtgtgaatcggttgtttgattttagcgaacaaccgccgtttctc
tataaagacattcaatttatgcccgtaagcgcgagaacggatcacccgcaattttggtta
agcgggcagccggagcctgcggtgcgtttttatgtggatgaagcctctgttaaagaaaac
atagcaaaagcttgcgccgtttctatccaatattggctacaaagtgcggtggaaaactct
gccgtttttcgccttgatgatggtgacaaaaaaacgctgaaaccggaaagtatcgccgtg
ttggtgcgtagccgtaaagaagccgagttggtgaaaaatgaattgcgtcacttgggcatt
gcctccgtgtatttgtctgaagacagcaatgtgttcgacagcagcgcggcaaaagatttg
ttaatgattctcacggcgtgcctcaatccgttttacgaacgccatattttaaacgccatt
gccacagcaatttttgcccaaaccagcgccgacattcagcgcattcgtatggatgaaacc
cgttgggagcattgggtggagaagtttattcattaccaaagaacctggcaaaaacaaggc
gtgttggtgatgttacatcagttgttccagcaggaaaaaataacggaaaaactttacccc
actgtggacggcaaacgcttggttacggacttgctgcatttggcggaattgctgcaggaa
gcggcgaccctgaacgaaagcgaagcggcattgttacgttggtttgagaaacaaattcaa
ggggaaaatcgccaaaaagagcaacaggttaggttggagagcgaattgcggttggtgaaa
atcgtcactattcataaatccaaggggttggaatacgatctggtttggttgccgtttatc
ggctatgcttccaccttccgaggcgatcgcatcaccacttattatgacgaaacacaaggc
gcggtgctgtgggattacgataaatcccatgaagcgttggtgcaacaggaagattttgcc
gaacagctacgcctgctttatgtggcgttgacccgcgccaaataccagttagtgatcggc
gtgccgcaaacctttgagacgaaatggagcagtttgttatatgtgctgacccacggagcg
atccaaacgcgcgaaaaaccgaatgcttacgacagcctccctttattggaaaaacttgtg
gcgcgtgcgccgcagggcagtgtgcaaattgccaacacggcagatttgataccgctgcaa
ttgcaagcccacgccgaagcacagataccgttacatgcggcaaaattcaccggcaatata
gaacaaaactggacggtcaccagtttcagcgccatagaagccattcatcagaataaagcc
tatttcaaagcgcaacagatggcggaaagtgcggtcgattttccaagtgtttttgactta
gggaaagactatgattttaacgaacaagggcaatcaaccgagagtattcgggaaacggct
gccgacgaatccgcctatcctttcggctattcgccttttgatttcccgcacggtattaac
atcggcacggcattacaccgttttctggaaaaaacggattttgatcgcccgttaaacgaa
gacaaaatccaaaaactctgccaatggttacagttagaggaaacctggctaccgtcttta
cagcaatggataaacgccattttgcatacgccgttaagcacgcaggattctactttgcaa
ctggtgaatttaacccgccaacattgcgtgaaagaaatgcagttttatttgaagttaaat
caaacatttgacgtgacggcgtttaatcaaacgttacaacagcatcaccacttaccctca
gaacccctgcaatttgaagcgattaaaggaatgttacgcggtttcatggatttggtgttt
tatcataacgaaaaatattatttggcggattacaaatccaattttcttggcgtggaagcg
caaaactacgtcggcacaagccttcagcaagccatgctaactaatcattacgactggcaa
tatttattttacacgctggcattgcaccgttatttacaacaacgtgacgcaaactatgac
tacgacacccatttcggcggcgtattttattgtttcttacgcggcatgaacggcgaaaat
cagaacggcgtgttttttgataaaccggattacgcgttgattcaggctttggagaatttg
ttctaa
DBGET
integrated database retrieval system
