Paracidovorax citrulli: Aave_2449
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Entry
Aave_2449 CDS
T00451
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aav
Paracidovorax citrulli
Pathway
aav03030
DNA replication
aav03430
Mismatch repair
aav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Aave_2449
03430 Mismatch repair
Aave_2449
03440 Homologous recombination
Aave_2449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aav03032
]
Aave_2449
03400 DNA repair and recombination proteins [BR:
aav03400
]
Aave_2449
Enzymes [BR:
aav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Aave_2449
DNA replication proteins [BR:
aav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Aave_2449
DNA repair and recombination proteins [BR:
aav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Aave_2449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
LPD1
Motif
Other DBs
NCBI-ProteinID:
ABM33024
UniProt:
A1TPY6
LinkDB
All DBs
Position
2672955..2673686
Genome browser
AA seq
243 aa
AA seq
DB search
MTRQIVLDTETTGLSAEGGDRIIELGCVELLNRKLTGNNLHLYFNPERDSHEDALKVHGI
SNEFLKDKPKFAEVVDEILEYLQGAEIIIHNAAFDVGFLNKELELTGRPAFTSYVESVTD
TLVMAKEMYPGKRNSLDALCDRLGVDNSGRTLHGALLDAELLADVYINLTRGQDALLIAD
DAQEGDETAVRLAPVDLSAFTLPVLLASEQELAAHDEVLAQIDKASGGKTIWKISSDGQK
AMP
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgacgcggcagatcgttctcgataccgaaaccacgggcctgtccgcggagggtggcgac
cgcatcatcgaactgggatgcgtggagctgttgaaccgcaaactgaccggcaacaacctg
cacctgtacttcaacccggagcgcgacagccacgaggacgcgctgaaggtgcacggcatc
agcaacgagttcctgaaggacaagcccaagttcgccgaggtggtggacgagatcctggaa
tacctccagggtgctgaaatcatcatccacaacgcggccttcgacgtgggcttcctgaac
aaggagctggagctgacgggtcgtcccgcgttcaccagctacgtcgagagcgtgacggac
acgctggtgatggccaaggagatgtacccgggcaagcgcaactcgctggacgcgctgtgc
gaccggctgggcgtggacaactccggtcgtacgctgcacggggcgctgctggacgcggag
ctgctggccgatgtgtacatcaacctcacgcgcggccaggatgcgctgctgatcgccgac
gacgcgcaggagggcgatgaaaccgccgtgcgcctggcgcccgtggatctttcggccttc
acgctgccggtgctcctggccagcgagcaggaactggctgcgcacgacgaagtcctggcc
cagatcgacaaggccagcggcggcaaaactatttggaaaatttcttcggacggccaaaaa
gctatgccataa
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