KEGG   Paracidovorax citrulli: Aave_2449
Entry
Aave_2449         CDS       T00451                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
aav  Paracidovorax citrulli
Pathway
aav03030  DNA replication
aav03430  Mismatch repair
aav03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Aave_2449
   03430 Mismatch repair
    Aave_2449
   03440 Homologous recombination
    Aave_2449
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aav03032]
    Aave_2449
   03400 DNA repair and recombination proteins [BR:aav03400]
    Aave_2449
Enzymes [BR:aav01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Aave_2449
DNA replication proteins [BR:aav03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Aave_2449
DNA repair and recombination proteins [BR:aav03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Aave_2449
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1 LPD1
Other DBs
NCBI-ProteinID: ABM33024
UniProt: A1TPY6
LinkDB
Position
2672955..2673686
AA seq 243 aa
MTRQIVLDTETTGLSAEGGDRIIELGCVELLNRKLTGNNLHLYFNPERDSHEDALKVHGI
SNEFLKDKPKFAEVVDEILEYLQGAEIIIHNAAFDVGFLNKELELTGRPAFTSYVESVTD
TLVMAKEMYPGKRNSLDALCDRLGVDNSGRTLHGALLDAELLADVYINLTRGQDALLIAD
DAQEGDETAVRLAPVDLSAFTLPVLLASEQELAAHDEVLAQIDKASGGKTIWKISSDGQK
AMP
NT seq 732 nt   +upstreamnt  +downstreamnt
atgacgcggcagatcgttctcgataccgaaaccacgggcctgtccgcggagggtggcgac
cgcatcatcgaactgggatgcgtggagctgttgaaccgcaaactgaccggcaacaacctg
cacctgtacttcaacccggagcgcgacagccacgaggacgcgctgaaggtgcacggcatc
agcaacgagttcctgaaggacaagcccaagttcgccgaggtggtggacgagatcctggaa
tacctccagggtgctgaaatcatcatccacaacgcggccttcgacgtgggcttcctgaac
aaggagctggagctgacgggtcgtcccgcgttcaccagctacgtcgagagcgtgacggac
acgctggtgatggccaaggagatgtacccgggcaagcgcaactcgctggacgcgctgtgc
gaccggctgggcgtggacaactccggtcgtacgctgcacggggcgctgctggacgcggag
ctgctggccgatgtgtacatcaacctcacgcgcggccaggatgcgctgctgatcgccgac
gacgcgcaggagggcgatgaaaccgccgtgcgcctggcgcccgtggatctttcggccttc
acgctgccggtgctcctggccagcgagcaggaactggctgcgcacgacgaagtcctggcc
cagatcgacaaggccagcggcggcaaaactatttggaaaatttcttcggacggccaaaaa
gctatgccataa

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