Alteromonas stellipolaris R10SW13: AVL56_11755
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Entry
AVL56_11755 CDS
T04403
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
aaw
Alteromonas stellipolaris R10SW13
Pathway
aaw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AVL56_11755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaw03400
]
AVL56_11755
Enzymes [BR:
aaw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AVL56_11755
DNA repair and recombination proteins [BR:
aaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AVL56_11755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AMJ94903
LinkDB
All DBs
Position
complement(2746757..2750377)
Genome browser
AA seq
1206 aa
AA seq
DB search
MLALYPSNKLEHLSFLLTTLIKHQPNGVFTPETILVESPGMQHWVSMQLAKEQGVAMNLD
FPLPVRFMWSTARLVLGKDKVPKQSPYRREVLAWRIDALLLEAAGKETSLQSKAAFEQVN
KYWLQAGSVQEQGVQRLQLATALADVYEQYLLYRPDWLFAWEENQRKTNDESEIWQSEIW
RHLSKQEPLHPARLHQLTLTALNSGDHLESGVSELPNRIVVFAINTMAPQLIAFFDALAA
HIDIHIFHLNPSVNYWGDAKSDSELARQLRMDGLEKWMQTDQSNPLLGNLGQQGRELFNL
LTDLDTFEVSAFDAPIPADSESGEILLLNQIHNDILEALPATPLASIKSTDADLCENTDD
SVTIMCTHSALREVQVLHDHLLHWLSQDASRTPSDVLVMCPAIENYAPFVDTVFHRVGTK
PLGGNGPVRLPCTIADRSPMDAEPLIAAYMTLLHLPDSRFGVSDIVDYLQLDAVQKRFSI
AQDDIDQMTVWLKQAHIHWGLDGSHKANVSAGATHENTYSWWWGIRRLLLGMLAPDSEGI
IDDMLTIPDVEGQSTVTLGKLIHVIELLGRFATELNTPRSPNAWGADLLALRDTCFTPTK
EQEHSWDLIAKVAADLAARCEEAGYTYDLSLRQVRELLLSRFSSPDAGNHFMTGQVTVCS
MLPMRSIPFKKVCILGLNDSEFPRKSTPLGLDLMAGPDRRVGDRSRRLEDRYLFLEAIIS
ARESLYLSYQGNDVKNNSERQPSLVLGEFLDMLDTGYQVNIGHYLKHAPLHPFSESAFTG
ALPSYETGWLRLAQSLRDAVSPAPETESSSIDGNKKGREGGKKGSEIQSSLAPLAVDSTP
ENTSFQCMQVARAFRDPLEFFSQQRLGVNLSQSFTLLDNSEPFETNALVRYQVLDAMFSS
SASFDDANAATLQHSDRVVQFAALRGDIPNNPVAQEELELWKESAVALTQAMGPHDAEPK
RAQFAGNHFTFTASALEGGSSLMQPCAGKVNDIRALGYFMTQLVFSASDDVTPHTQYPLD
IFYCDWVKGETKLMKRTFPAVDKHTARQVLLSIESLFVGILSAPTPVYSSLMSAVVSGTK
KSPGTLLANKVTVPIFLASLEANSKIDAEFEDGAQGGGTQFDSDTEDTEEVGKSLIPDIC
AFFASEDAQRILKNWLQSSGQFTADIASNPYVKWLFPDGVSWHDMPTTQAFLLFALVVNI
SSEEQL
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgcgctttatccatcgaacaaacttgaacacctcagcttccttcttactacgcta
atcaagcatcaacctaatggcgtttttacccctgaaaccatactagtagaaagcccaggc
atgcagcattgggtaagtatgcaacttgctaaagagcaaggcgtggcgatgaaccttgat
tttccgttaccggttcgctttatgtggagcacggcaaggttagtgttgggtaaagataaa
gtacctaagcagtcgccttaccgacgtgaagtgcttgcatggcgcattgatgcactttta
ctagaagcggcgggaaaagaaacatcgctacaatctaaagctgcgttcgagcaggttaat
aaatactggttacaagcgggcagtgtgcaagagcaaggtgtacaacgactgcaattggca
accgcgttagccgatgtgtacgagcagtatttgttatatcgtccagattggttgtttgcg
tgggaagaaaaccagcgcaaaacgaatgatgagtctgaaatttggcaaagtgaaatatgg
cgtcatctatccaagcaagaacctttacacccagcaagactgcaccaacttacccttacc
gcgttaaatagcggcgatcatcttgaaagcggcgttagcgaattacccaaccgtattgtg
gtgtttgctattaacaccatggcgccgcagttgattgcttttttcgatgcgttagcggcg
cacatcgatattcatatttttcatttgaaccccagtgttaattattggggcgatgcgaaa
agcgatagcgaactagcaaggcagctgcgcatggacgggctagagaaatggatgcagacg
gatcaaagtaacccgttattaggtaatttgggtcagcagggcagagagcttttcaatttg
ctcaccgatttagacacttttgaagtcagtgccttcgacgcgcccattccagctgatagt
gaaagcggtgaaatcttattactaaaccaaattcataacgatatattagaagcgttaccg
gctacgcctctcgcaagtataaaaagcacagatgcagacctctgtgaaaacactgatgac
agtgtgaccattatgtgtacccattcagcgctacgtgaagtacaggtgctgcacgatcat
ttactgcactggttatcgcaagatgcatcaagaacgccatctgatgtgctggtgatgtgc
cccgcgatagaaaactatgccccttttgtagacacggtatttcatcgggtgggaactaaa
ccgctaggaggcaatgggccagtgcgcttgccatgtactattgccgatagaagccccatg
gatgctgagcctcttattgccgcttacatgacactccttcatttgcctgatagtcgtttt
ggcgtatcagatattgtcgattacttgcaactagatgcggtacaaaaacgctttagtatt
gcacaagatgatattgaccaaatgacagtatggcttaagcaagctcatattcactggggg
ttagacggcagccacaaagccaatgtatcggcaggagccacccatgaaaacacctacagt
tggtggtggggaattaggcgtttattgttaggtatgttagcgccagatagcgaaggtatt
atcgatgacatgcttaccattcccgatgtggaaggtcagtcgacggtaaccctaggtaag
ctaatccatgttattgagctacttggtagatttgccactgagcttaataccccacgaagc
ccgaatgcgtggggggccgatttattagcactgcgtgatacctgctttaccccaaccaaa
gagcaagaacacagctgggaccttattgctaaagtggccgctgatttggctgctcgatgt
gaagaagcaggttatacctacgatttaagtttacgtcaggtgagggaattactgctaagt
cgtttctcatctcctgatgcaggtaaccactttatgacgggacaagtgacggtatgttcc
atgctgcctatgcgtagtatcccgtttaaaaaagtctgcatattagggcttaacgacagc
gagtttcctcgtaagtctacacccttaggcctcgatttaatggcggggcctgatagaaga
gtaggcgaccgttcccgtcgtttagaagacagatacctctttttagaagcgattatttcg
gccagagaaagcttgtatttaagctaccaaggtaacgatgtaaaaaataacagtgagcgc
caacctagcttagtgttaggtgaatttctggatatgttagacacgggctatcaggtaaac
attggccattatttaaagcatgcgccattacacccgttcagtgaaagcgcgtttaccggc
gcactccccagctatgaaacgggctggttacgcctagcccaatcactacgtgatgctgtt
tcgcctgcccccgaaaccgaaagctctagcattgatggcaacaaaaaaggcagagaaggc
ggtaaaaaaggcagcgaaatacaaagttcactcgcgcctttagcggtagacagcacacct
gaaaacaccagctttcagtgtatgcaggtggcacgcgcgtttcgcgatccactagagttc
ttttcacagcagcgattaggggtaaacttatcccagtcattcaccttactagacaatagc
gaaccttttgaaacaaatgcgctagtacggtatcaagtactcgacgcaatgttttcttca
agtgcttcatttgatgatgcgaatgcggcaactcttcagcacagcgatagagtagtgcaa
ttcgccgcgcttcgtggtgacattcccaataaccctgtagctcaagaagagctagagctg
tggaaggagagcgcggtagcccttacccaagcgatggggcctcatgatgccgaaccgaaa
agagcgcaatttgcaggcaaccactttacctttactgccagtgcgcttgaaggcggaagc
agcttaatgcagccgtgcgcaggtaaggtgaatgatataagagccttaggttactttatg
acccagcttgtgtttagtgcaagcgatgatgtaacaccccatactcaatatccgctagat
atcttttactgcgattgggtaaaaggtgaaactaagctaatgaagcgcacgtttccagca
gtggacaaacatactgcccgccaagttttgttaagtattgaatcattattcgttggcata
ttaagtgcccctacgccagtgtatagctcattaatgagtgctgtagtaagtggtactaag
aaatcacctggcacccttttggcaaacaaagtcaccgtacccatatttctggctagcctt
gaggctaattcaaaaattgatgctgaatttgaagacggtgctcaaggtggtggtactcaa
tttgatagtgataccgaagatacagaagaagtcggcaagtccctcatacctgatatatgc
gcattttttgccagtgaagatgcccagcgcatacttaaaaattggctacagtcatcgggg
caatttaccgctgatatcgcgagtaacccttatgttaaatggttatttcctgatggcgtg
agttggcatgatatgccaaccacacaggcttttttattgtttgctttggtcgttaacatt
tcatcagaggagcagttatga
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