Alteromonas stellipolaris R10SW13: AVL56_13025
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Entry
AVL56_13025 CDS
T04403
Symbol
recR
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
aaw
Alteromonas stellipolaris R10SW13
Pathway
aaw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AVL56_13025 (recR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaw03400
]
AVL56_13025 (recR)
DNA repair and recombination proteins [BR:
aaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AVL56_13025 (recR)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AVL56_13025 (recR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_C
RecR_ZnF
RH_dom
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AMJ95132
LinkDB
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Position
complement(3039313..3039912)
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AA seq
199 aa
AA seq
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MKFSPLLNELIQALTCLPGVGNKSAQRMAFHLLERNRKGAIDLSNMLHNAMEHIHHCKRC
RTFTEDELCEICRHPEREASGLLCIVESPQDVLAIEQTLSYKGQYFVLMGHLSPIDGVGP
EEIGLNELETRFSAGGIDEVILATNPTVEGEATAHYIAQLCAAHNVEASRIAHGVPVGGE
LEYIDGNTLTHAFSGRRKL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttagcccgttactgaatgaattaattcaagcgttaacttgcctgcctggggta
ggtaataagagtgctcagcgtatggcgtttcaccttctagagcgcaaccgtaagggcgcg
atagatttaagtaatatgctgcacaacgctatggagcacattcatcactgcaagcgctgt
agaacatttacagaagatgagctatgcgaaatttgccgtcaccccgagcgcgaggccagt
ggattattatgtattgttgaaagcccgcaagatgttttggccattgaacaaacgcttagt
tataaagggcagtattttgtattgatgggacatttgtcgcctatcgatggagtagggcct
gaagaaattggcttaaacgaattagaaacccgctttagtgcaggtggcatagacgaagtc
atccttgccaccaaccccaccgtggaaggtgaagccactgcgcattatatagctcagctt
tgtgcggcccataacgttgaagcatctcgtattgcccatggtgtgcctgtgggcggcgag
cttgaatatatagacggtaacacccttactcacgccttttctggtcgccgcaaactctaa
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