Candidatus Koribacter versatilis: Acid345_4497
Help
Entry
Acid345_4497 CDS
T00352
Name
(GenBank) Deoxyribodipyrimidine photo-lyase type II
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
aba
Candidatus Koribacter versatilis
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aba03400
]
Acid345_4497
Enzymes [BR:
aba01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Acid345_4497
DNA repair and recombination proteins [BR:
aba03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Acid345_4497
Prokaryotic type
Acid345_4497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ABF43497
UniProt:
Q1II03
LinkDB
All DBs
Position
5337702..5339042
Genome browser
AA seq
446 aa
AA seq
DB search
MYWMQRAQRAFDNPALDVAVQAANALKLPCVIFFAPVPFYPHANLRHYAFLQQGIPDIAE
MAEERDIGFVLRRFPEHSLIKFCDEVKAALVIGDENPMRELREWREIAAKKLRVPLWTVD
ADVIVPSKLLGKEQYAARIIRPRLKAHFKELLVPCENPRAHVKWHAARGLQQLDWRGTED
ITEGWEIDRSVKPVDSFHGGTREALRLLDEFVKHGLTRYPERHNQADENGTARLSPYLHF
GHIGPHTVALAVEKSKVPREAKDDFLDQVITWRELAINMVHFNPLYDTLECGENWAHKTL
GEHAKDPRPIQYTPKQLEAAETYDDLWNAAQLQMVHAGWMHNYMRMYWAKKILEWSKSPQ
VAYNTAVYLNDKYFLDGRDPNGYAGIAWAIVGKFDRPWFPRPIFGTIRYMARSGAEKKFD
AEKYIAQMYALAGRERGKDKEAPMLF
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgtactggatgcagcgcgcgcagcgggcattcgataatccggcgctcgatgtagccgtg
caggcggcaaacgcgctgaagctgccgtgcgtgatcttcttcgcgccggtgccgttttat
ccgcatgcgaatttgcggcattacgcgttcctgcaacaaggtattcctgacattgcggag
atggcggaggaacgcgacattgggttcgtgctgcggcggttcccggaacattcgctgatc
aagttttgtgacgaagtcaaagcggcgctcgtgatcggcgatgagaaccccatgcgtgag
ctgcgagaatggcgcgagattgccgcgaagaagctcagggtgccgctgtggacggtggat
gccgatgtgattgtgccttcgaagctgctggggaaagaacagtatgcggcgcggattatt
cgcccgcggctgaaggcgcatttcaaagagttgcttgtgccgtgtgaaaacccaagagcg
cacgtgaaatggcatgcggcgcgcggattgcagcagttggactggcgcggaaccgaggac
atcaccgaaggatgggagatcgaccgctcggtgaagccggtggattcgtttcatggagga
acgcgggaagcgctgcggctgctggatgaattcgtgaagcatgggttgacgcgttatccc
gaacggcacaatcaggcggatgaaaacggaacggcgcggctgtcgccgtatctgcatttc
gggcatattgggccgcataccgtcgcgctggcggtggagaagtcaaaggttccgcgggag
gcgaaggacgactttctcgaccaggtaattacgtggcgggagttggcaatcaatatggtg
cacttcaatccgttgtacgacacgcttgagtgcggagagaactgggcgcacaagacgctc
ggtgaacatgcgaaagatccgcggccgatccaatacacgcccaagcaactcgaagcggcc
gagacgtacgacgatctctggaatgccgcgcagttgcagatggtgcatgcgggctggatg
cacaactacatgcggatgtactgggcgaagaagatcctggagtggagcaaatcgccgcag
gtggcttacaacaccgctgtgtatttgaacgacaagtactttctggatgggcgcgatccg
aatgggtatgcggggattgcgtgggctatcgtcggaaagtttgatcgtccgtggtttccg
cggccgatctttgggacgatccgctacatggcgcgcagtggagcggaaaagaagttcgac
gccgagaagtacattgcgcagatgtatgcgttggcggggagagagcgcgggaaggataag
gaagcgccgatgcttttttga
DBGET
integrated database retrieval system
