KEGG   Luteitalea pratensis: LuPra_01422Help
Entry
LuPra_01422       CDS       T04394                                 

Definition
(GenBank) Putative DNA ligase-like protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
abac  Luteitalea pratensis
Pathway
abac03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:abac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    LuPra_01422
Enzymes [BR:abac01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     LuPra_01422
DNA repair and recombination proteins [BR:abac03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     LuPra_01422
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID: AMY08229
UniProt: A0A143PKE2
LinkDB All DBs
Position
complement(1704718..1706844)
Genome map
AA seq 708 aa AA seqDB search
MARTVQLWRDEAPPAPMLATPCELDALNLDNSSMLYEQKFDGIRAIVIVEPAHPSARVRL
LSRNGNDKATQFPEIVRALRELAAQLSGTVILDGEVVALDARGQPASFTALQSRMHLKGA
MDIDARSATVPTALVVFDLLREGVEDLRPLPLAARRARLEYLLHVRTSERLREGLYVAGH
GRNVLAQAKREGWEGLIVKDADAPYLSGVRSRTWRKVKLHKTATLVIGGWTDPKGTRSGF
GALMVGRFTDARGKPARPAKGSDATLCYAGNVGGGFSDAAISDLLLRLRPLARTTSPFVD
APRARGQHWVDPRLLCEVRFSEWTPEGRLRHPVFLGLRDDVGPDAVDPTGRDGSPSRPAQ
QPRPRATMRESSLEGAGVDMDASERRPYLPITAIVEQLQLLEDAGRDGSLTLPDGVLEVT
NPKKVFWPASGLTKGNLLRYYARISPWLLPVIADRPLVMKRYPNGVLGKAFYQQRAPDTV
PAGVNVQVVEGDEDDDGPMPRLIGGSLLTLLYVAQLGAISLDPWFSRAASPAAADFVAID
LDPMPGVPFAQVRDVARWVREALVMLDVPAALKTSGSSGLHIYIPLAEGTSYQSGQLLCQ
IIATAVASQHPKVATVERAVARRGRTVYVDYLQNIEGKTLACAYSARASQFAGVSTPLQW
DELDQDIRPEDFTLENAFTRFETTGDLWNPILRGTPVDLRAVIGRLGG
NT seq 2127 nt NT seq  +upstreamnt  +downstreamnt
atggcccgtacggtccagctctggcgtgacgaggcgccccccgcgccgatgctggccacc
ccgtgtgagttggacgcccttaacctcgacaactcatcgatgctctacgaacagaagttc
gacggcatccgcgccatcgtcatcgtcgaaccggcccatccgagcgcgcgggtccgcctg
ttgtcgcgcaacggcaacgacaaggccacgcagtttcccgagatcgtccgcgccctgcgc
gaactggcagcgcagttgtccgggacggtgatcctcgacggcgaagtcgtcgcccttgac
gcccggggacaaccggcgtccttcaccgcgctgcaatcccgcatgcacctcaagggcgcg
atggacatcgacgcccggtcggcgacggtgccgacggccctggtagtgttcgacctcttg
cgcgagggggtcgaggatctccgtccactgcccctggctgcacgccgcgccaggctggag
tacctgctgcacgtgcgcaccagcgagcgcctgcgtgaaggcctctacgtcgccggacac
ggcaggaacgtgctggcacaggccaaacgggagggttgggagggactgatcgtcaaggat
gcggacgcgccgtacctgtccggcgtgcgctcgcggacatggcggaaggtcaagctgcac
aagacggcgacgctggtgatcggcggctggaccgacccgaaggggacgcgatccgggttc
ggcgccctgatggtcggacgcttcaccgatgcgcgcggcaagccggcgcgccctgcgaag
ggcagcgacgcgacgctgtgctacgcgggcaacgtcggtggcgggttcagcgacgcggcc
atctcggatctcctcctgcggctgcgaccgctggcacggaccacgtcgccgttcgtcgat
gccccgcgcgcccgcggacagcactgggtggatcccagactgctctgcgaggtgcggttc
agcgagtggacgcctgaggggcgactgcgtcatccggtcttcctcgggctgcgtgacgac
gtcggccctgacgcggtcgatccgacaggtagggacggctctccgagccgtccagcgcaa
cagccccgaccaagggcgacgatgcgcgaatcctccctggagggcgcaggtgtggacatg
gacgcctcggagaggcgtccctaccttcccatcaccgccatcgtcgaacagctccagtta
ctcgaggacgccgggcgcgacggctctctgacgctgcctgacggcgtgctggaggtcacg
aacccgaagaaggtcttctggccagcgtcgggcctgaccaagggtaacctgctgcggtac
tacgcgcgcatctcgccatggctgttgccggtgattgctgatcgcccactggtcatgaag
cgctatccgaacggcgtgctcggcaaggcgttctaccagcagcgcgcacccgacaccgtc
ccggcgggcgtcaacgtgcaggtcgtcgaaggcgacgaggacgacgacgggccgatgccg
cggctcatcggcggatcgttgctgacgctgttgtacgtggcgcaactcggcgccatctcg
ctcgacccgtggttctctcgggcggcctcgcccgcggcggccgatttcgtggcgatcgat
ctcgacccgatgccgggcgtgcctttcgcgcaggtgcgcgacgtggcgcgctgggtccgc
gaggcgctcgtaatgctcgacgtcccggcggcgctcaagacgtcggggtcgtcaggcctg
cacatctacatcccgttggcggaaggcacgtcttaccagtccggccagctgctgtgccag
atcatcgccaccgcggtcgcgtcgcagcatcccaaggtcgcgaccgtggagcgggcggtc
gcccggcgcggacgcaccgtctacgtggactacctgcagaacatcgagggcaagacactg
gcctgcgcctacagcgcccgcgcgagccagtttgccggcgtctcgacgccgctgcagtgg
gatgaactcgaccaggacatccggcccgaggacttcacgctcgagaacgcgttcacgcgg
ttcgagaccaccggcgatctgtggaacccgatcctgcgcggcacccctgtcgacctccgc
gccgtcatcggtcgcctcggcggctga

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