Acinetobacter baumannii D1279779: ABD1_02640
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Entry
ABD1_02640 CDS
T02491
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
abad
Acinetobacter baumannii D1279779
Pathway
abad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABD1_02640 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abad03021
]
ABD1_02640 (rpoB)
03400 DNA repair and recombination proteins [BR:
abad03400
]
ABD1_02640 (rpoB)
Enzymes [BR:
abad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABD1_02640 (rpoB)
Transcription machinery [BR:
abad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABD1_02640 (rpoB)
DNA repair and recombination proteins [BR:
abad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABD1_02640 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RelB
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
AGH34155
LinkDB
All DBs
Position
298834..302922
Genome browser
AA seq
1362 aa
AA seq
DB search
MAYSYTEKKRIRKNFGKLPQVMDAPYLLSIQVDSYRTFLQDGKSPKNREDIGLQAAFRSV
FPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAAPMRVKIRLIIKDRETKSIKDVR
EQEVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIP
YRGSWLDFEFDAKDLVYVRIDRRRKLLATVVLRALGYNNEQILNLFYEKVPVYLDMGSYQ
IDLVPERLRGEMAQFDITDNEGKVIVEQGKRINARHVRQMEAAGLTKLSVPDEYLYERIT
AEDITLRDGEVIAANTLLSHEVMVKLAEGGVKQFNILFTNDIDRGSFVADTLRADLTRDR
EEALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLSPVGRMKFNRRLGRPYEVGTDQ
KSREVEGILSHEDIIDVLRTLVEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRV
ERAVKERLSQAETDNLSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVS
ALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKANDFGFLETPY
RKVVDGRVTDDVEYLSAIEEVGTVIAQADSAVDKDGNLTEEFVSVRHQGEFVRMPPEKVT
HMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMEANVARD
SGVCVIANRGGVIEYVDASRIVIRVNEDEMVAGEAGVDIYNLIKYTRSNQNTCINQNVIV
NLGDKVARGDILADGPSTDMGELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSI
HIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVTAGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKAADVKDSSLRVPSGTKGTVIDVQVFTRDGLEKDDRALAIEKA
QLDSYRKDLKEEYKIFEEAARERVIRLLKGQESNGGGSTKRGDKLSEDLLSGLELVDLLE
IQPADEAIAERLTQIQVFLKEKSAEIDEKFAEKKRKLATGDELTTGVLKVVKVYLAVKRR
IQPGDKMAGRHGNKGVVSNILPVEDMPHDANGVPVDIVLNPLGVPSRMNVGQILETHLGM
AAKGLGDKIEKMLKEQRTVLELREFLDKIYNKVGGEQEDLDSLTDEEILALAGNLRAGVP
LATPVFDGAEESQIKDLLELADISRTGQTVLFDGRTGEQFDRPVTVGYMYMLKLNHLVDD
KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGR
TRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggcatactcatataccgaaaagaaacggatccgtaagaattttggtaaattgccccaa
gtaatggatgcaccgtacttattatcgattcaggtcgattcgtacagaacattcttgcaa
gatggcaaatcaccaaaaaaccgcgaagatatcggtctccaagccgcatttcgttcagtt
tttcctatcgaaagttattctggcaatgctgctttagaatttgttgagtatagccttggt
aaacctgagttcgatgtacgcgaatgtattcttcgtggctcgacttatgcggcaccaatg
cgcgttaaaattcgtttgattattaaagatcgcgaaactaaatcaattaaagacgtacgc
gaacaagaagtctatatgggtgaaattccactcatgactgaaaatggtacctttgttatc
aacggtactgagcgtgtaatcgtatctcaattacaccgttcgccaggcgtattctttgac
catgataaaggtaagacccactcaagtggtaaagtgttgtattcagcacgtatcattcct
taccgtggttcatggttagacttcgaatttgatgcaaaagacttagtttacgtacgtatc
gaccgtcgtcgtaaattacttgctactgttgtgttacgtgcactaggttataacaatgaa
cagatcttgaatttgttctatgaaaaagtacctgtgtatcttgacatgggtagctatcaa
attgacctcgtacctgagcgtttacgtggtgaaatggctcaatttgatattactgacaat
gaaggtaaagtcattgttgagcaaggtaaacgtattaatgctcgtcatgtacgtcaaatg
gaagctgcaggtttaactaagctttcagttcctgatgaatacttatatgagcgtatcact
gctgaagatattactttacgtgatggtgaagtaattgctgcaaatactctgttaagccat
gaagtaatggtgaagttggcagaaggcggtgttaagcaatttaatatcttgttcactaac
gatattgaccgtggttcattcgtagctgatacattacgtgctgacttgacgcgtgatcgt
gaagaagcattagtagaaatctacaaagtaatgcgtccaggcgagccaccaacaaaagaa
gctgctgaaaacttattcaataacttgttcttctcttctgaacgctatgacttatctcca
gtaggtcgtatgaagttcaaccgtcgtttaggtcgtccttacgaagttggtactgatcag
aagtcacgcgaagttgaaggtattttatcgcacgaagatattatcgatgtattacgtaca
ttggttgaaatccgtaacggtaaaggtgaagtcgacgatatcgaccacttaggtaaccgt
cgtgtacgttctgttggtgaaatgacagagaaccaattccgtgtaggtttagttcgtgtt
gagcgtgctgttaaagagcgtttaagccaagcagaaacagataacttgtctccacaagat
ttgattaatgcaaaaccagttgctgctgcaatcaaagaattctttggttcaagccagtta
tctcagtttatggaccaaaacaacccattatctgagattacacataaacgtcgtgtatct
gcgcttggtcctggtggtttaacacgtgaacgtgcaggcttcgaagtacgtgacgtacac
caaactcactatggtcgtgtttgtccaattgaaactcctgaaggtccaaacattggtttg
atcaactcgctttctgtatatgcaaaagcgaatgacttcggtttcttggaaacaccatac
cgcaaagttgtagatggtcgtgtaactgatgatgttgaatatttatctgcaattgaagaa
gtaggtactgttattgcacaggccgactctgcagtagataaagatggcaacttaacagaa
gaattcgtttctgttcgtcatcaaggtgaattcgtacgtatgccgcctgaaaaagtaacg
catatggacgtttctgcacagcaggtagtatctgttgctgcatcacttattccattcctt
gaacacgatgacgcaaaccgtgcgctcatgggttcaaacatgcaacgtcaggcagttcct
actttacgtgcggataaaccgcttgtaggtacaggtatggaagcgaacgttgcacgtgac
tctggtgtgtgtgtaatcgcaaaccgtggcggtgtaattgaatatgtagatgcttctcgt
atcgttattcgtgtaaacgaagatgaaatggttgcaggtgaggcaggtgtagatatctat
aacctcatcaaatatacgcgttcaaaccaaaatacttgtattaaccaaaatgttatcgtg
aacttgggcgacaaagttgctcgtggtgacatcttggcagacggtccgtcaacagacatg
ggtgaacttgcgcttggtcaaaacatgcgtgtagcgttcatgacatggaatggttacaac
tacgaagactcgatcttgttatctgagcgtgtacttcaagaagaccgtttaacctctatt
cacattcaagaattgtcatgtgtagcacgtgatactaagttaggtgcagaagaaattact
gccgatattcctaacgtaggtgaagctgcgctttctaaacttgatgaatcaggtatcgtt
tatatcggtgctgaagttactgctggtgacatcttagttggtaaagtaacgcctaaaggt
gaaactcagttaactcctgaagaaaaactgcttcgtgcaatttttggtgagaaagcagct
gacgttaaagactcatctttacgtgttccatctggtactaaaggtacagttattgacgtt
caagtcttcactcgtgatggcttagagaaagatgaccgtgctttagcaattgaaaaagca
cagcttgattcttaccgtaaagacttgaaagaagaatacaagatcttcgaagaagcggct
cgtgagcgtgtaattcgtttgcttaaaggccaagagtctaatggcggtggttcaactaaa
cgtggtgataaactttctgaagatttattatctggtttagagcttgttgacttacttgaa
attcaaccagcagatgaagcaatcgctgagcgtttaactcaaattcaagtgttcttgaaa
gagaagagcgcagaaatcgatgagaaattcgctgagaagaaacgtaagcttgcaacaggt
gatgaattaacaactggcgtattaaaagttgttaaggtttacttagctgttaaacgtcgt
attcagcctggtgataagatggctggtcgtcacggtaacaagggtgttgtatctaacatc
ttacctgttgaagacatgccacatgatgctaacggtgtgccggtagatatcgtattgaac
ccgctgggtgtaccatctcgtatgaacgtgggtcagattctagagactcacttgggtatg
gcggctaaagggcttggtgacaaaatcgaaaaaatgttgaaagaacaacgtacagtttta
gaactgcgcgaattcttagacaagatttataacaaagtcggcggtgagcaagaagatctt
gatagcttgactgatgaagaaattctagcgcttgcaggtaacttgcgtgcgggtgtgcct
ttagctactcctgtatttgatggtgctgaagaaagtcaaattaaagacttacttgaattg
gctgacatttcacgtacgggtcaaacagtattgtttgacggacgtacaggtgaacagttt
gaccgtccagtaactgttggttacatgtacatgcttaaattgaaccacttggttgatgac
aagatgcatgcgcgttcaactggttcttactcacttgttacacaacaaccgcttggtggt
aaagcacaattcggtggtcagcgtttcggtgagatggaagtatgggcacttgaagcatac
ggtgcagcatatacactccaagaaatgcttacagtgaagtcggatgacgttgaaggccgt
actcgcatctataagaatattgtagatggtaaccattatatggatccgggtatgcctgaa
tcgttcaacgtattgaccaaagagatccgttctttaggtatcaacattgaactaaaaaat
ggtgactaa
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integrated database retrieval system
