Acinetobacter baumannii D1279779: ABD1_03300
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Entry
ABD1_03300 CDS
T02491
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
abad
Acinetobacter baumannii D1279779
Pathway
abad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABD1_03300 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abad03400
]
ABD1_03300 (recD)
Enzymes [BR:
abad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABD1_03300 (recD)
DNA repair and recombination proteins [BR:
abad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABD1_03300 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
UvrD-helicase
SH3_13
AAA_11
Viral_helicase1
SLFN-g3_helicase
Helicase_RecD
Herpes_Helicase
ResIII
AAA_22
PhoH
DEAD
nSTAND3
AAA
PIF1
T2SSE
AAA_16
Flavi_DEAD
AAA_28
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AGH34221
LinkDB
All DBs
Position
382170..383921
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AA seq
583 aa
AA seq
DB search
MDNLNSPEQSDLSWLTTWSTFLNQAPFTAQTQAPEAAYFLQQLIEASLQGDSCIEISPEQ
IETLGQLVISAEQAKSQVAPCVHDGQGLALYRYWNLEQRLAEQIRRLKQQPIQPVSCEEH
LDLLTDPHQQAALQMVTRQSLSIITGGPGTGKTYTLARIIAVLSQAIPHIRVAMAAPTGK
AAQRMQEALQNSFNDPKLLESGLMSDELRNQSTQTIHRLLGMGHSQTPRFNQKQPLPYDV
IVVDEASMLDLNLATLLFEAVPESCRIILLGDANQLASVDVGAVLADLQQIEALSENRVH
LQTSRRFAEGALIGQVARFIQMQTGQIDHEQVLQQFEIDIVQVSELRSIPLETDMPDVVQ
LEYLPEESPIALETYYQKLMVGFQGYVQSLKAYLQDDRSTEHIENIVKSFDDYRILTAVR
HGPFGLQQLNQYAERWLQQQLGIVTLGGWYVGRPVMMTYNDYQLGISNGDIGLCFEHRTQ
PQQFEVYFPSLNKWVAANRLPKSIQSAFALTIHKSQGSEFTHTAVVLDQAAKNLLSQELI
YTAITRAKKVVSLLVDPEALLQSFTVRTTRKSGLVEKVNRLVR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
gtggacaatctaaatagccctgaacaaagcgatttaagctggttaacgacttggagtacc
tttctaaatcaagccccgtttactgcacagacacaagctccagaggcagcttattttttg
cagcagctgattgaagcgagcttgcagggtgacagttgtattgagattagcccagagcaa
atagaaacacttggccaactggtgatatctgctgaacaagcaaagtctcaagttgcccct
tgtgtccacgacgggcaggggttggcattataccgatattggaacctagagcaacgtcta
gctgagcaaattcgccgattaaagcaacaaccaattcaacctgtttcatgtgaagagcat
ttagacttattaacagatcctcatcagcaagctgctttgcaaatggtgactcggcagagc
ttaagtattattacaggtgggccgggtacaggtaagacctatacgctcgctcgtattatt
gctgtgcttagtcaggcaattccacatattcgtgtagcgatggctgctccaacgggtaaa
gctgcacagcgtatgcaagaagccttacaaaactcctttaatgatccaaaactgcttgag
tcggggttaatgagtgacgagctaagaaaccaaagtacccaaactatccatcgattatta
ggtatggggcatagtcaaactccacggtttaatcaaaaacagcctttgccttatgacgtt
attgtagtggatgaagcctctatgctggacttaaatctggcaacgttattatttgaagcg
gtccctgagtcttgtcgaattattttattaggcgatgccaaccagcttgcttctgtagat
gttggagcggtacttgcagatttacagcaaatcgaggctttgtctgaaaaccgtgttcac
cttcaaaccagccgtcgttttgcggaaggggctttgattggacaggttgcccgatttatt
caaatgcaaactggtcaaattgaccatgagcaagttttacaacaatttgaaatcgatatt
gttcaggtttcagaattacgttcaatacctttagaaaccgacatgcccgatgtggttcag
cttgaatatttacccgaagagtcccctatagcgctagaaacttactaccaaaaattgatg
gtgggttttcaaggctatgtgcaaagcttaaaagcttatttacaagatgatcgttcaact
gaacatattgaaaatatcgttaagtcattcgatgactaccgtattttaactgccgtacgt
catggaccatttggtttgcagcaacttaatcaatatgctgaacgctggttacaacaacag
ctaggtattgtgactttaggaggatggtatgttggccgtccggttatgatgacctataac
gattaccagctcggtatttcaaatggtgacattggtttatgttttgaacatagaacccag
ccgcaacagtttgaagtgtatttcccaagtttaaataagtgggttgctgcaaatcggcta
cctaaaagtattcaaagtgcatttgccttaacaattcacaaatcacaaggttctgaattt
acccatacagctgttgttcttgatcaggctgccaagaatttgttaagccaagagttgatc
tacactgcgattacacgagccaaaaaagtagtgagtttattggtcgatccagaggcgtta
cttcaatcttttacagttcgcacgacaagaaaaagcggtttagttgaaaaagttaatcgg
ttagttcgttaa
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