Candidatus Nanopelagicus limnes: B1s21122_03180
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Entry
B1s21122_03180 CDS
T05073
Name
(GenBank) primosomal protein N' (replication factor Y) (superfamily II helicase)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
abam
Candidatus Nanopelagicus limnes
Pathway
abam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B1s21122_03180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abam03400
]
B1s21122_03180
Enzymes [BR:
abam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B1s21122_03180
DNA repair and recombination proteins [BR:
abam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B1s21122_03180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
Motif
Other DBs
NCBI-ProteinID:
ASY09348
UniProt:
A0A249JXU0
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All DBs
Position
complement(655908..657809)
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AA seq
633 aa
AA seq
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MAAPLKLKRQQTAQKPKSKLIADLFPVAAVLVDTPVSHLEGVYDYLVPLHLEDSAVYGTK
VVVPFGNTQVDGLIVGRKNDSQQIKNLKMIVDVSSPSGLISSQVIEHLELVRNRFGGSFW
SLLKSALPARVAKEDKMISDIRSPSASETYESPQLRDLIGRSDYGMLIGKQRLKWAINLP
IGIASSNFVNEIIKLRARTGQVLVIVPDEKDLLALKNDLKNFFGTSFLELGTHLGKSDRY
KNFLIARFSRPSLIVSTRSGVFTDLEENSTVVVLSDLDQSHYEQHSPGWNTRDVSLLRSK
NTSLLFISASHSMEISRLIEIGWLEKKNYRNKNGIQIVTGENGRSFVSSVKKGIAQGNVL
VTVAEKGYANLFLCAKCRNTANCKCGGKLQIQGANSVPTCYLCDTQQRDWKCQYCGESKP
YVISKGIDRNAEEIGRAIPKASILISSGSKQIADLPNGKHVVLATAGSEPNGRYSSLVLL
DGERMFSRPSLRAEEFAKFQWFSSLCKVLPNSEVFVTLQNHHPVVQSMLKADSNSGASLE
LINREKAKLPPFYRVAVIIGSNLEISKFAENLRSSKDYEITGPVKFDQNQSKLIIRVKLE
EGGNLVDLLDDVSKIQGVKGRQIFKIRVDPYDI
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtggctgctccacttaaattaaaacgccagcaaactgcacagaaacctaaatcaaaatta
atagctgatcttttcccggttgcagcagtattagttgacacaccagtttcacatcttgaa
ggagtttatgattatttagttccgttacatttagaagattcagctgtatatgggacaaag
gttgttgtcccgttcggaaatacccaagttgatggattaatagttggtcgtaaaaatgat
tctcaacaaataaagaacttgaaaatgattgttgatgtttcttcacccagcggcttgata
tcgagccaagttatcgagcatctggaattagttcgcaatcgttttggtggatctttttgg
agccttcttaaatctgccctgcctgctcgtgtagctaaagaagataaaatgatttccgat
attaggtcaccatctgcgtctgaaacatatgaaagcccacaacttcgggatctaataggt
agatcagattatggaatgctcataggaaagcagaggttaaagtgggcaataaatcttcca
attgggatcgcatctagtaacttcgttaatgaaataatcaaacttcgagctcgaactggg
caagtactcgtcattgttccagatgaaaaagatttattggccttaaagaatgatttgaaa
aacttttttgggacttcttttttggagctgggtactcatttaggaaagagcgatcgatat
aaaaatttcctgattgctagattctctagaccttctttaatcgtttcaactagaagcgga
gtatttaccgatttagaagagaactcaactgtagtggtgttgtccgacttagatcaatct
cactatgagcaacattctcctggatggaatacacgtgatgtttctttactgcgaagtaaa
aatacttctttgttgttcatatcagcatcgcattccatggaaatttctcgattaatagaa
ataggctggctggagaagaaaaattaccgaaacaaaaatggaattcaaatagtaactggt
gaaaatggtagatccttcgtttcctccgtaaaaaaaggtattgcccaagggaatgtattg
gtgactgtggccgaaaaaggctatgcaaatctttttctatgcgccaaatgccgaaatact
gcaaactgtaaatgtgggggtaagttacagatacaaggcgctaattcagttccaacttgt
tatttatgtgatacgcaacaaagagactggaagtgtcaatattgcggggaatctaaacct
tatgttatttctaaggggattgatcgcaacgctgaggaaataggacgcgcaattccgaaa
gcatcaattttgatctcatccgggagtaagcaaattgctgatctaccaaatggtaaacat
gtagttctagcaacagctggatcagaacctaatggtagatattcgagtttagtactacta
gatggtgaaagaatgtttagtcgaccatcgttaagagctgaggaatttgcaaaatttcaa
tggttctcatcactttgtaaagtgttgccaaatagtgaagtgtttgtaacgttacaaaat
catcaccctgttgttcaatctatgcttaaagcagattcaaattccggagcttcattggaa
ttaattaatagagagaaagcaaagctgcctcctttctatcgtgtagcagtcataattggg
tctaatcttgaaatttccaaatttgcagagaatttaagatctagcaaagattatgagata
accgggccagttaagttcgatcagaaccaatctaaattaataattcgtgtgaaattggag
gagggtggaaatttggtggatttgcttgatgatgtatcaaaaattcaaggagtaaagggc
cgacagatcttcaaaattcgcgttgatccatatgacatataa
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