KEGG   Georhizobium profundi: D5400_14775
Entry
D5400_14775       CDS       T05798                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
abaw  Georhizobium profundi
Brite
KEGG Orthology (KO) [BR:abaw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:abaw03032]
    D5400_14775
   03036 Chromosome and associated proteins [BR:abaw03036]
    D5400_14775
   03400 DNA repair and recombination proteins [BR:abaw03400]
    D5400_14775
DNA replication proteins [BR:abaw03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    D5400_14775
Chromosome and associated proteins [BR:abaw03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    D5400_14775
DNA repair and recombination proteins [BR:abaw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      D5400_14775
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 DUF2267 HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: AZN72370
UniProt: A0A3Q8XPN5
LinkDB
Position
complement(3046587..3046859)
AA seq 90 aa
MNKNELVAAVAEKTGMAKTEAGSAVEAVFEVITGELKSGGDVRLIGFGNFSVSRREASKG
RNPSTGAEVDIPARNVPKFSAGKGLKDSVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaagaatgaactcgtcgctgccgtcgccgagaagaccggcatggcaaagaccgag
gcgggctccgctgttgaggccgtcttcgaagtcatcaccggcgaattgaagtcgggtggc
gacgtgcgcctcattggttttggaaatttttcggtctcgcgccgcgaagcttcgaagggc
cgtaacccctcgactggcgctgaagtggacatcccggcacgcaacgttcccaagttctct
gccggtaagggcctcaaggactccgtcaactaa

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