Asaia bogorensis: Asbog_01011 Help Entry Asbog_01011       CDS       T04138                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism abg  Asaia bogorensis Pathway abg03030   DNA replication abg03410   Base excision repair abg03420   Nucleotide excision repair abg03430   Mismatch repair Brite KEGG Orthology (KO) [BR:abg00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Asbog_01011    03410 Base excision repair     Asbog_01011    03420 Nucleotide excision repair     Asbog_01011    03430 Mismatch repair     Asbog_01011  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:abg03032]     Asbog_01011    03400 DNA repair and recombination proteins [BR:abg03400]     Asbog_01011 Enzymes [BR:abg01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      Asbog_01011 DNA replication proteins [BR:abg03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      Asbog_01011 DNA repair and recombination proteins [BR:abg03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      Asbog_01011    NER (nucleotide excision repair)     GGR (global genome repair) factors      Asbog_01011    MMR (mismatch excision repair)     DNA ligase      Asbog_01011   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       Asbog_01011 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB BRCT DNA_ligase_ZBD HHH_2 PTCB-BRCT RNA_ligase DZR_2 Motif Other DBs NCBI-ProteinID:  BAT19296 UniProt:  A0A0P0YF78 LinkDB All DBs Position complement(1113672..1115726) Genome browser AA seq 684 aa AA seqDB search MTDTPAREHARLAALIARWNDAYYRDDAPEVSDSEYDETRRALIALEEAHPDLRTEGGIA ERIGAAPDNAFGKQPHRVPMLSLDNVFNTEEFEAFVAKAARFLGLDAKAADQLTFVAEPK IDGLSINLTYVNGALLRGTTRGDGLVGEDVTANLRTIADIPQKLEGEFPQEIEIRGEIFM AKADFLSLNETMQVQGQKVFANPRNAAAGSLRQLDPNVTARRPLSLFAYAQGFSSQRCAA THWDWLEQLKRWGFPVNPLSTRIGHASEIAGYIANLARERSSLPYDIDGVVFKLDDIDLQ TRLGFAGRAPRWAIAWKFPSEQAITRLEKIEIQVGRTGALTPTAHLEPVNVGGVIVSRAT LHNEDEIARKDVRPGDLVRVQRAGDVIPQILGPVPEDKPRGPAFIFPTHCPVCGALTERP EGEAVRRCTGGLTCEAQVVERLIHFVSRPAFDIDGLGERSIREFHEIGLIDRPGDIFRLR DKADIIRDREGWGEVSTRNLLNAIEQRRTIAFSRFLFGLGIRRIGERNAQLLARHYQTYE AWFDSMRAAAMIGSDDRLALGSIMGIGQSIVADLLAFFAEPHNVEALADLRAQLTIEPES RPEEGPLSGKTIVFTGTLHTMTRPEAKAIAERLGAQVSDSVSKKTGLVVLGEKAGSKAKK AAELGLETCDEAGWRAIAGLPPAG NT seq 2055 nt NT seq  +upstreamnt  +downstreamnt atgactgatacccccgcccgtgagcacgccagattagcggcgctcattgcgcgctggaac gacgcctattaccgcgacgacgcccctgaagtgtcagattcggaatatgacgagaccaga agggcgcttattgcccttgaagaagcccaccctgacctcaggactgagggcggcattgct gaacgcattggtgcggcgccggacaatgcctttggcaagcagccccaccgcgtgcccatg ctgtcgctcgacaacgtcttcaataccgaggaattcgaggctttcgtggcgaaagccgcc cgcttcctcggactggatgccaaggcggccgatcagctcactttcgtcgccgagcccaag atcgatggcctgtcgatcaacctcacttatgtaaacggcgcgttgctgcgcgggacgaca cgcggtgacgggctggtgggcgaggatgtcaccgccaatctgagaaccattgctgacatt ccgcaaaagctcgaaggagagttcccgcaggagattgagatacgcggcgagatcttcatg gcgaaggccgatttcctgtcgctcaacgaaacgatgcaggtacagggacagaaggttttc gcgaacccgcgcaacgctgctgcagggtcactgcgccagcttgaccccaatgtgactgcc agacgccctctgtcgctttttgcctatgcgcagggcttttcgagccaacgctgtgccgca acacactgggattggctggagcagttgaaacgttggggcttcccggtcaatccgctttca acacgcatcggccatgccagcgagatcgccggttatatcgccaatcttgcccgcgaacgc tcatccctgccctatgacatcgatggtgtcgtcttcaagctggatgatatcgacctccag acccgtctcggctttgcaggccgtgcgccgcgctgggccattgcatggaaattcccctcc gagcaggccatcacgcggctggaaaaaatcgagatacaggtggggcgtacgggcgcgctt accccaacggcccatctggaaccggtcaatgtcggtggtgtcatcgtgtcacgcgcaacg ctgcacaacgaagacgaaattgcgcgcaaggatgtccgccccggcgatctggtacgtgtg cagcgcgcaggcgatgtcattccgcaaattctcggccctgtccccgaggacaagccgcgt ggcccggctttcatcttcccgacgcattgtcccgtctgtggcgccctgacagagcgcccc gaaggtgaggctgtacgacgttgcacgggcggcttgacctgcgaggcgcaggttgtcgag cgcctgattcatttcgtctcccggccggcattcgatatcgacgggctgggtgagcgctcc atacgcgagttccacgagatcggcctgatcgaccggcccggcgatattttccgcctgcgg gacaaggccgacatcatccgtgaccgtgaaggctggggcgaggtatcgacgcgcaatctg ctcaatgccatcgagcagcgccgtaccatcgccttcagccggtttctcttcgggcttggc atacggcgtatcggcgagcgcaatgcccagctcctggcacgccattaccagacctatgaa gcctggttcgactccatgcgcgctgccgccatgatcggttctgacgaccgtcttgccctg ggcagcatcatgggtatcggccagagcatcgtggccgatctcctcgctttttttgccgag ccgcataatgtggaggcgctggctgatctgcgggcgcaactcacaatcgagccggaatcc cgccccgaggaaggcccgctttcgggcaagaccatcgtgtttaccggcacgcttcacacc atgacgcgccctgaagcgaaggccattgctgagcgcctgggcgcgcaggtgagcgattcc gtatcgaaaaaaaccgggctggtggttctgggtgaaaaagccggatcgaaggcaaagaaa gctgccgagcttgggcttgagacctgcgacgaggcgggctggcgcgcaatcgccgggttg ccgccagccggttaa

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