Aliarcobacter butzleri 7h1h: A7H1H_1066
Help
Entry
A7H1H_1066 CDS
T02755
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
abl
Aliarcobacter butzleri 7h1h
Pathway
abl03030
DNA replication
abl03410
Base excision repair
abl03420
Nucleotide excision repair
abl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A7H1H_1066 (ligA)
03410 Base excision repair
A7H1H_1066 (ligA)
03420 Nucleotide excision repair
A7H1H_1066 (ligA)
03430 Mismatch repair
A7H1H_1066 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abl03032
]
A7H1H_1066 (ligA)
03400 DNA repair and recombination proteins [BR:
abl03400
]
A7H1H_1066 (ligA)
Enzymes [BR:
abl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
A7H1H_1066 (ligA)
DNA replication proteins [BR:
abl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A7H1H_1066 (ligA)
DNA repair and recombination proteins [BR:
abl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
A7H1H_1066 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A7H1H_1066 (ligA)
MMR (mismatch excision repair)
DNA ligase
A7H1H_1066 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A7H1H_1066 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
PTCB-BRCT
HHH_2
BRCT_2
HHH_5
DNA_ligase_ZBD
DUF5748
MCM_OB
Motif
Other DBs
NCBI-ProteinID:
AGR77367
LinkDB
All DBs
Position
complement(1006517..1008475)
Genome browser
AA seq
652 aa
AA seq
DB search
MTKEEYDLNIEKLISWANAYYVFDNPIATDEEYDKLARLCLAYEQENPKLSHPNSPNKRV
GGIVLDGFIKASHLSRMWSQEDVFNTQELEDWIKRASKVNTNLEFFCQPKFDGASLNLIY
ENGILKQAITRGDGTVGEDVTNNAKTIFSIPLEIEEKSLIEIRGEVVIKKADFEKINIER
AKNGEQLFANPRNAAAGSLRQLDSNITAKRKLFFNVWGIGQNSLEHKKYSQIMEYIYSLG
FERPQMQTLASNIEEIESLYHKFISIRNDFEMMLDGMVIKIDDIETQEELGYTVKFPRWS
CAYKFPAVEKTTKLKAITLQVGRTGIITPVAEVEPTLIDGSTVSRATLHNFDEIERLDLK
INDEVIIIKSGDIIPKITKVFFERRKGDEITISRPTSCPTCNSEVLDEGTMIKCQNLDCP
SRVVNSIIYFASKNCMNIDGLGNKIVEQLFNEKKIYDILDIYSLKYEDLQDLEGFKEKKI
NNLLNAIENTKGSELHRVINALGIEHIGEVASKQICLEFGLDVINKDYDSLIALDGFGEQ
MANSFIEFMRVNKNLVEKLISIINPKVEIKKEVSENPFKNKTVVITGTMSKSRGEIKSML
EDLGAKVSSSVSKKTDYVIFGEDAGSKYDKAIELGVKLLTEEEMNSLFKLEK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagaagagtacgatttaaatatagaaaaattaatatcttgggctaatgcttat
tatgtttttgataatccaatagcaactgatgaagagtatgacaaattagcaagactttgt
ttagcttatgagcaagaaaatccaaaactttctcatccaaattcaccaaataaaagagtt
ggtggaattgttttagatggattcataaaagcttctcatcttagtcgtatgtggagtcaa
gaagatgtttttaatacgcaagaacttgaagattggataaaaagagcttcaaaagtaaat
acaaatctagagtttttttgtcaacctaagtttgatggagcttctttaaatcttatttat
gaaaatggtattttaaaacaagctattacaagaggtgatggaactgttggtgaagatgta
acaaataatgcaaaaacaattttttctattccacttgaaatagaagaaaaatctttaata
gagattcgtggtgaagttgtaataaaaaaagcagattttgaaaaaatcaacattgaaaga
gcaaaaaatggtgaacaactttttgcaaatcctagaaatgcagcagctggaagtttaaga
caacttgattcaaatataactgcaaaaagaaagctatttttcaatgtttggggaattggt
caaaattcattagaacataaaaaatattcacaaattatggaatatatatactctttagga
tttgaaagacctcaaatgcaaacattagcttcaaatatagaagaaatagaaagtttatat
cacaaatttatctctataagaaatgactttgaaatgatgcttgatggaatggttataaaa
atagatgatatagaaacacaagaagaacttggttatacagtaaaatttccaagatggtca
tgtgcttataaatttccagcagttgaaaaaacaacaaaactaaaagcaataactttgcaa
gttggtcgaacaggaattataactccagtagcagaagtagaaccaacactaattgacggt
tcaactgttagccgtgcaacattacataactttgatgaaatagaaagattagatttaaaa
ataaatgatgaagtaattatcataaaaagtggagatatcatcccaaaaatcacaaaagta
ttttttgagcgaagaaaaggagatgaaataactatatctcgccctacttcatgtcctact
tgtaatagtgaagttttagatgaaggaacgatgataaaatgtcaaaatcttgattgtcca
tcaagagttgtaaactcaatcatctattttgctagtaaaaattgtatgaatatagatggt
cttggaaataaaatagttgaacaactattcaatgaaaaaaagatttatgatattttagat
atttattctttaaaatatgaagatttgcaagatttagaaggttttaaagagaaaaaaata
aacaatcttctaaatgcgatagaaaatacaaaaggtagtgaacttcatagagttataaat
gctttaggaatagaacatataggtgaagttgcatcaaaacaaatatgtttagaatttggc
ttggatgtgataaataaagattatgattcacttatagcacttgatggttttggtgaacaa
atggcaaattcatttattgaatttatgagagtaaataaaaatttagttgaaaaacttatc
tctataataaatccaaaagttgaaataaaaaaagaagtaagtgaaaatccatttaaaaat
aaaactgttgtaataacaggaactatgagtaaaagtcgtggtgaaataaaatctatgctt
gaagatttaggtgctaaagtatcttctagtgtttcaaaaaaaactgattatgtaattttt
ggagaagatgctggaagtaaatatgataaagctattgaattaggagtgaaactcttaact
gaagaagagatgaattcactatttaagttagaaaaataa
DBGET
integrated database retrieval system
