Acinetobacter baumannii SDF: ABSDF0448
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Entry
ABSDF0448 CDS
T00660
Symbol
rpoA
Name
(GenBank) RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
abm
Acinetobacter baumannii SDF
Pathway
abm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABSDF0448 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abm03021
]
ABSDF0448 (rpoA)
03400 DNA repair and recombination proteins [BR:
abm03400
]
ABSDF0448 (rpoA)
Enzymes [BR:
abm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABSDF0448 (rpoA)
Transcription machinery [BR:
abm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABSDF0448 (rpoA)
DNA repair and recombination proteins [BR:
abm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABSDF0448 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
CAO99839
UniProt:
B0VQU3
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All DBs
Position
409790..410797
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AA seq
335 aa
AA seq
DB search
MTRTANEFLTPQAIKVEAVSGTSAKVILEPLERGFGHTLGNALRRILLSSLPGAAVVEVE
IEGVEHEYSTLEGLQQDIVELLLNLKGLSIKLFDQNEAYLTLEKQGPGDITAADLRLPHN
VEVVNPEHLIGTLSATGSLKMRLKVSQGRGYETSDSRFPEGETRPVGRLQLDASYSPIKR
VSYTVENARVEQRTDLDKLVIDLETNGTVDPEEAIRKAATILQQQIAIFVDLQKDQTPVA
QEPREEVDPILLRPVDDLELTVRSANCLKAENIYYIGDLVQRTEVELLKTPNLGKKSLTE
IKDVLASKGLQLGMRLENWPPASLRMDDRFAYRSR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtactgcaaacgagtttctaactccgcaagcgatcaaggtcgaagcggtaagc
gggacctcggcaaaagtgattctggaacctttagagcgtggttttggccatactctaggt
aatgctttacgtcgcattctattgtcttctttgccaggcgctgctgtggttgaagtagag
atagaaggtgtcgagcacgagtacagtactttagaaggcttgcagcaggacatcgtcgag
ctcttgctgaacctaaaaggattgtctattaagctgttcgatcaaaatgaagcttattta
acattagaaaaacaaggtcctggtgacattactgctgccgaccttcgtttacctcataat
gttgaagtggttaacccagaacatttaattggtactttgagtgctacaggctcattaaaa
atgcgcttgaaagtttctcaaggtcgtggttatgaaacatctgactctcgtttccctgaa
ggcgaaacacgtcctgtaggtcgtttacagttagatgcttcttatagcccaattaaacgt
gtttcttacaccgtagaaaatgcgcgtgtagaacaacgtaccgatttagataaactggta
atcgatcttgagaccaacggtacggttgatcctgaagaagcaatccgcaaagcggcaaca
atcttgcaacaacaaattgcaatttttgttgatcttcagaaagaccaaactcctgttgct
caagaacctcgtgaagaagttgacccaatcttgcttcgcccagtagatgatctagagctt
actgttcgttctgctaactgtttgaaagcagaaaatatttactacattggtgatcttgtt
caacgtactgaagttgagttgttaaaaactcctaacctcggtaaaaaatcgttaacagag
atcaaagatgttttggcatcgaaaggtttacaactcggtatgcgtcttgagaactggcca
ccagctagtcttcgtatggacgaccgttttgcctatcgtagccgttaa
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