Alcanivorax borkumensis: ABO_0002
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Entry
ABO_0002 CDS
T00380
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
abo
Alcanivorax borkumensis
Pathway
abo03030
DNA replication
abo03430
Mismatch repair
abo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABO_0002 (dnaN)
03430 Mismatch repair
ABO_0002 (dnaN)
03440 Homologous recombination
ABO_0002 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abo03032
]
ABO_0002 (dnaN)
03400 DNA repair and recombination proteins [BR:
abo03400
]
ABO_0002 (dnaN)
Enzymes [BR:
abo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABO_0002 (dnaN)
DNA replication proteins [BR:
abo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABO_0002 (dnaN)
DNA repair and recombination proteins [BR:
abo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABO_0002 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
CAL15450
UniProt:
Q0VT29
LinkDB
All DBs
Position
1478..2578
Genome browser
AA seq
366 aa
AA seq
DB search
MKFSINREQLLKPLQQVAAVVEKRQTLPVLSNVLLEVGDGQLSMTGTDLELELVARLPLE
GELEPGETTVPARKLVDIGKSLPAEADIRFEVDGERMLVRSGRSRFTLSTLPASEFPNLE
EDAAGSSLEIKPDVLRGLIDRTAFSMAQQDVRYYLNGMLFELKSGRLRAVATDGHRLALC
DAELDVPVEEASVILPRKGVMELSRILGDSGEVARLTIGRNHVRIVVGAITFTSKLVDGK
FPEYDRVIPKEGSRKVVADRETLRQALARVAILSNEKYRGVRVQLSEGSLRIVANNPEQE
EAEEEVSVDFNGSPLEIGFNVSYLLDVLNTMGGTQAELEMGDSNSSALVFDPESKAAVYV
VMPMRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctcaatcaatagagaacagctgctcaagccgctacagcaggttgcggcagtg
gtggagaagcggcagaccttgccggtactgtccaatgtgttattggaagtgggtgatggc
cagctatctatgaccgggacagacctggaactggagctggtcgcccgtttgccgcttgag
ggcgagcttgagcctggcgaaaccaccgtgccggcccgtaagctggtagacattggcaag
agcttgccggcggaggcggatatccgttttgaggtggatggtgagcgcatgctggttcgt
tctggccgtagccgctttactctgtccaccctgccggcctccgaattcccgaatctggaa
gaagatgccgctggcagtagccttgagattaagccggatgtgttgcgtggtctgattgat
cgaacagcgttttctatggctcagcaggatgtgcgctattacctgaacgggatgcttttt
gaacttaagtctggccgtttgcgtgcggtggctaccgatggccaccgcctggccctgtgc
gatgcagaactggatgtacccgtggaagaggcgtcggttattctgccgcgcaaaggggtg
atggaactatcgagaatcctcggggatagcggtgaagttgcacgcctgactattggtcgt
aatcatgtgcgtatcgtggtcggagcgatcactttcacgtccaagttagttgatggtaag
tttccggaatatgaccgagtaatcccgaaggaaggatcccgtaaggtggtggctgaccgt
gagaccctgcgccaagcgttggctcgggtggcgatcctttctaacgaaaagtaccgtggt
gtgcgggtgcagttgtctgagggtagtttgcggattgtggctaacaacccagagcaggaa
gaagcggaagaagaagtgtccgtagattttaatggctcgcccttggagattggtttcaat
gtcagctatctgttggacgtgctgaatactatgggtggcacgcaggcggaattggagatg
ggtgatagcaatagcagtgccctggtttttgatcctgagagtaaggcagccgtgtatgtg
gttatgccgatgcgcctctga
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