Alcanivorax borkumensis: ABO_2706
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Entry
ABO_2706 CDS
T00380
Symbol
alkS
Name
(GenBank) alkB1GHJ regulator
KO
K21748
LuxR family transcriptional regulator, alkane degradation pathway regulator
Organism
abo
Alcanivorax borkumensis
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
abo03000
]
ABO_2706 (alkS)
Transcription factors [BR:
abo03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
ABO_2706 (alkS)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
HTH_24
Sigma70_r4_2
Sigma70_r4
HTH_28
HTH_40
Motif
Other DBs
NCBI-ProteinID:
CAL18154
UniProt:
Q0VKZ4
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Position
complement(3060396..3063014)
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AA seq
872 aa
AA seq
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MLCDNLENWCLRMSDRMWARQRFITQGCIERGRLKASAESESKVILYRAPLGYGKSVQVA
FEAGTQGREEGGVAYINTRSYPGSGEITDSLLAALILYQIKGREPWSVIQSNDDIIESLR
DTLCNAKNPIKICIDGIGEAEHGVGLVENLICETPNNVKFYIAPSNAGALARLSMMAGVV
TYGAHDLVFTEEEVCELPGMHSAKAKNVIEATGGWPALVGLMCHTSNPNLPAATWPETRS
YFRNNLLNALPNNTREFICKAAMLEEISVACYDYVYKTEEAHKEIPFINENYALFTPTES
SRECMVMHPVLREYLRGLFDSIQRERRSYVLKRVAFWHWRRGEYLHSINAAQEASDHSWA
RAVSDSIILDVALRQGEIEVLRTWFEKVPVRTIKKIASLSISYAWILYFSQQARQAEKIL
ASSTESCSRGLDNLDEKGWRKLVDAVGKATQDQFAQSQTLCQQWIDTFGERNMVGKGAAL
TCQAYIASSDRRFEDLEQLLHRGAVANQSSNQHYAFVWLKTAELQAEIFKGDIAHAMSIL
LEANKTAEKMGVSKTFLNKMLGSLELQILHEKSPSLISYESAEESFNFALNYGVTDILWG
CTQTFSSFLYQQGLRDRAMAILEQTRIAACERDLPRLNMLAKIQLAEFTLINDEELEPPI
LPDESELTFLPNQNQAIRARIALVNSMYRLRLGKQFGVAEKYAKKALQSASAISDARTKI
AAQYCQALAVFGLGSSKLAKRTIIDADQLTEHLSCYFTRDWIKEALMSFSPIARDLFDTL
PESAETNATKDLEVRKEEADARPKLTNTQSTITIKQISLLKCVSSGMTNKEIAERLLITE
DTVKWHLKKIFSELKVTNRVRAVSEARLRGLL
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcgataacttggaaaactggtgccttagaatgtctgaccggatgtgggcccgg
cagcgttttattactcaagggtgcatagagcgcggtcgcctgaaagcctctgccgagtcc
gaatcaaaagttattctttaccgggcccctttaggttatggcaagtctgtgcaagttgct
ttcgaggcgggcactcagggccgagaggaggggggcgtcgcctatatcaatacgcgatcg
tatcctggctccggtgaaattacggattctttgttggctgcgttaattttatatcaaatt
aaaggccgtgaaccctggagcgttattcaaagtaatgatgacatcattgagtcacttcga
gatacgctgtgtaatgctaaaaatccgataaaaatttgcatagatggcattggggaggct
gagcatggcgtgggcctggttgagaatttaatatgcgaaacccccaataatgtgaaattt
tatattgcgcccagtaatgctggagcgttggcgcgcttgtctatgatggcgggtgtggtg
acatatggcgcgcatgaccttgtcttcacagaagaggaagtatgtgagttgccgggaatg
catagcgccaaggctaaaaatgttatagaggctactggtggatggcccgcacttgttggg
cttatgtgccacacttcaaatccaaacctccccgctgcgacctggccggaaacccgttcg
tatttcagaaacaatctactcaacgcgctgccaaataatacacgggaatttatttgcaaa
gccgcaatgctggaagagatcagcgttgcctgctacgactacgtatataaaacagaagag
gcccataaagaaattccgtttattaatgaaaattatgcgctctttacccccacagaatct
tccagagagtgcatggttatgcacccggtgctaagagagtatttgcgtggtttgtttgat
tctattcagcgagagcgtcgctcatatgtgctaaagcgtgtcgcattttggcattggcgt
aggggtgagtatctccattcaatcaatgccgctcaggaggcgagcgatcacagctgggct
cgagcggtaagcgatagcattatcttagacgtagcactcaggcaaggcgaaatagaggtg
cttcgaacatggttcgaaaaagtgccggttcgaacgataaaaaaaatcgcgtccttaagc
atcagctatgcttggatcttgtatttcagccagcaagctcggcaagcagaaaaaatactg
gcaagctccacggagtcctgcagcagaggtttagacaaccttgatgaaaaaggatggcgg
aagctggtcgacgcggtaggaaaagcgacacaggatcaatttgcgcaaagccaaaccctc
tgccagcaatggattgatactttcggcgagcgtaacatggtcggcaagggagcggcgctt
acgtgccaagcatacattgcttccagtgatcgtcgctttgaggatttagagcaattatta
cacaggggagcggtagccaatcagtcttccaatcaacactacgcttttgtttggcttaaa
acggcagaacttcaggctgaaatatttaaaggtgatatcgctcatgcaatgagtatatta
cttgaagccaataaaacagcagagaagatgggggtgtcaaaaacatttttaaataaaatg
cttggctcccttgaattgcaaattctgcacgagaaaagccctagcctaattagttatgag
tctgcggaagagtcattcaacttcgcattaaactatggtgttacagatattttatggggt
tgcacgcaaacgttcagtagtttcctgtaccagcaagggttaagagatagggctatggcc
atattggagcaaacccggatagctgcctgcgaaagagacctacctcgacttaacatgcta
gctaaaatacagctggctgagtttacgcttataaacgatgaggaattagagccgccgata
cttcctgatgagagtgagctgacatttttgccaaatcaaaaccaagccattcgcgcacgt
attgcgctagtcaattcaatgtataggttgaggcttggaaagcagtttggtgttgctgaa
aagtatgcaaaaaaagcattacaaagcgccagtgcaatttcagacgctagaaccaagatc
gccgcccaatattgccaggcattagcggtttttggcctcggttcatcaaaattagcgaag
cgcacaattattgatgccgaccagcttacggaacatttaagctgttattttacccgagac
tggattaaagaagcattaatgtcgtttagccccattgctcgggatctttttgatacgttg
ccagaaagcgcagagactaacgctacaaaagatctcgaggtgagaaaagaagaggctgac
gcccgccctaaactcactaatacccaatcaaccattacgataaagcaaatttctctgttg
aaatgtgtaagcagtggaatgacgaacaaagagatcgctgagcggcttcttataacagag
gataccgtcaaatggcatctgaaaaagattttcagcgaacttaaagtaaccaaccgggtt
cgggcagtgtctgaagctaggctacgcgggcttctatag
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