Paracholeplasma brassicae: BN85309750
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Entry
BN85309750 CDS
T03095
Symbol
rumA
Name
(GenBank) 23S rRNA (Uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
abra
Paracholeplasma brassicae
Brite
KEGG Orthology (KO) [BR:
abra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abra03009
]
BN85309750 (rumA)
Enzymes [BR:
abra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BN85309750 (rumA)
Ribosome biogenesis [BR:
abra03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BN85309750 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Met_10
Cons_hypoth95
Methyltransf_15
RrnaAD
MTS
Methyltransf_31
Methyltransf_25
N6_N4_Mtase
Methyltransf_4
Methyltr_RsmB-F
TRM
PrmA
Methyltransf_11
Ubie_methyltran
Methyltransf_12
PCMT
UPF0020
Motif
Other DBs
NCBI-ProteinID:
CCV65996
UniProt:
U4KNX9
LinkDB
All DBs
Position
complement(1068913..1070241)
Genome browser
AA seq
442 aa
AA seq
DB search
MSVKLVCSRVDEQGYGIVYYNDQAYKVSNLLEGEEAEVELFSQSGKVVSLIKKSPDRVKP
VCGVYHLCGGCQLQHIRYEHQLDLKHDYVKNCFKEVNLDVPVLKPIGMNDPYHYRNKLQI
VFSEKKKKIVAGFYEENTHKVVNAEDCDIQDQVGNEIIKTFKQLMAKHKIKPYLEAKDEG
LIKHVLVKRSQVTKEVLVVIVTRDLVFPGRNNILKDLRQKHPEITSVVQNINPRRTSVVL
GNEEKVIFGKGYIEDVLLGHRFQIGSKTFYQVNPKQTEVLYQKAIELLNLSKNDVVLDAY
AGVGTIGISLAKQAKEVLCVEINPDSVKNAKKNAHINQINNIDFVCEDASKYITYMVNQK
VKLDAIVVDPPRSGLEKAFVDALNQIKVKKLVYISCDPKTLSRDLKQLSYKYDIHPVQPV
DMFSQTYHIENVVLLTAKKQVQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaaaattagtttgtagccgcgtggatgaacaaggttacggcattgtctattat
aacgatcaagcgtataaagtatcaaacctacttgagggtgaagaagcggaagtcgaacta
ttcagtcaatcaggcaaagtggtttctttaatcaaaaagagcccagatcgtgtgaaacca
gtttgcggggtataccatttgtgtggggggtgtcaactccagcacatccgatacgaacac
caactcgatttaaagcatgactacgttaaaaattgtttcaaagaagttaatcttgatgta
ccagtgttaaaaccaatcggcatgaatgatccatatcactatcgtaataagctgcaaatt
gttttttctgagaaaaagaaaaaaatcgttgcaggtttttatgaagaaaatacacataaa
gtcgtcaatgctgaggattgtgatattcaagaccaagtcggtaatgaaatcatcaagaca
tttaaacagttaatggcaaaacataaaatcaaaccttacttagaagccaaagatgagggt
ttaattaaacacgttttagtcaaacgaagtcaagttaccaaagaagtactcgttgttatt
gtcacgagggatttggtatttcctggaagaaataacattttaaaagatcttagacaaaag
catcctgagatcacttcggtcgtacaaaatatcaatccaagaagaacctcagtcgttcta
ggcaatgaagaaaaagttatttttggcaagggttacattgaggatgtcttactcggacac
cgattccaaataggctcaaaaacattttatcaagtgaatccaaaacaaaccgaagtactc
tatcaaaaagcaattgagctactaaatctatcaaaaaatgatgtggttttagatgcttac
gccggtgttgggaccattggtatctcacttgctaagcaagcaaaagaggttctttgtgtc
gaaattaaccctgattcggtaaaaaatgctaaaaaaaatgcacacatcaaccaaatcaat
aacattgatttcgtttgcgaagacgcatctaaatacatcacgtacatggtaaatcaaaag
gttaagcttgatgcgattgtcgtcgatccaccacgatctggtctagaaaaagcatttgtt
gatgcgttaaatcaaattaaggtaaagaagttagtatatatctcttgtgatccaaagaca
ctatcacgagatttaaaacaacttagttataaatacgacattcacccagttcaaccagtc
gatatgttttcacaaacgtatcacattgaaaatgttgttttattaactgcgaaaaaacaa
gttcagtag
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