KEGG   Acidianus brierleyi: DFR85_06760Help
Entry
DFR85_06760       CDS       T05472                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
abri  Acidianus brierleyi
Pathway
abri03030  DNA replication
abri03410  Base excision repair
abri03420  Nucleotide excision repair
abri03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:abri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DFR85_06760
   03410 Base excision repair
    DFR85_06760
   03420 Nucleotide excision repair
    DFR85_06760
   03430 Mismatch repair
    DFR85_06760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:abri03032]
    DFR85_06760
   03400 DNA repair and recombination proteins [BR:abri03400]
    DFR85_06760
Enzymes [BR:abri01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     DFR85_06760
    6.5.1.6  DNA ligase (ATP or NAD+)
     DFR85_06760
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     DFR85_06760
DNA replication proteins [BR:abri03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    DFR85_06760
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     DFR85_06760
DNA repair and recombination proteins [BR:abri03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DFR85_06760
   NER (nucleotide excision repair)
    Other NER factors
     DFR85_06760
   MMR (mismatch excision repair)
    Other MMR factors
     DFR85_06760
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-ProteinID: AWR94341
UniProt: A0A2U9IE79
LinkDB All DBs
Position
complement(1290610..1292406)
Genome map
AA seq 598 aa AA seqDB search
MEFKVIADYFDKLEKISSRIQLTATLADLFKNTDKTVIDKVVYLIQGKLWPDFTGQPEIG
IGEKFLIKAISIATSAKEEEIEKEFKNLGDLGQVAFNLKQNTQNSSILSYFGSQISQGLT
VEEAYDDLVKIATSQGEGSRDIKIRILAGLLKKATPLEAKYLVRFVDGRLRVGIGDATVL
DALAITFGGGQNFRPLIERAYNLRADLGNIAKVLVENGIEAIKTIKPQPGIPIRPMLAER
LSDPQEMMEKMNNIALVDYKYDGERAQIHKSKDNIFIFSRRLENITSQYPDVVEYVSNFI
RGEEFIVEGEVIPVDPESGEMRPFQELMHRKRKSDIHEAIKEYPVNVFLFDLMYYEGEDY
TVKPLPERRKKLESILSQNDKIHIATHIIVDNTDKLKEFFYQAISEGAEGVMLKSISNDS
IYQAGSRGWLWIKFKRDYQSEMADTVDLVLVGAFYGKGKKGGKYSSFLMAAYNPDKDVFE
TVCKVASGFTDEELDNLQKKIEELKRSDKHPRVDSEMIPDVWVTPSLVAEIIGAEITISP
LHTCCKDNYEKGGLSVRFPRFIRWRPDKSPEDATTSKEIYEMYNSQLKKIDDKTSENI
NT seq 1797 nt NT seq  +upstreamnt  +downstreamnt
atggagtttaaagttatagcagattactttgataaactagaaaaaatcagttcgagaatt
caacttacagccactctagctgacctgttcaaaaatactgataaaactgttatagataag
gtagtatatctgattcagggtaaactgtggccagattttactggacaaccagaaataggc
ataggtgaaaaatttctaataaaggcaatttctatagctactagcgctaaagaagaggaa
atagaaaaagaatttaaaaatctaggagatttaggtcaagtagcttttaatctaaagcaa
aatactcaaaattctagtatattatcttattttggctctcaaataagtcaaggtttaact
gtagaagaggcttatgatgacttagttaaaatagctacgtctcaaggcgaaggaagtaga
gatattaagataagaatattagcaggcttattaaagaaagctactcctttagaagctaaa
tatctagtaagatttgtagatggcagactcagagtcggtataggcgatgctactgtactt
gatgcgctagcaataacttttggcggtggacagaattttaggcctcttattgagagagcg
tataatttaagggcagatctaggtaatatagctaaggtattagttgaaaatggaatagaa
gctataaagacaataaagcctcaacctggaattccaataagacctatgttagcagaaaga
ctatctgatcctcaagaaatgatggaaaaaatgaacaatatagctctagtcgactataag
tacgacggagaaagagctcagattcataagagtaaagataatattttcatattttctaga
agactagaaaatataacaagtcaatatcctgatgtagtggaatacgttagtaattttata
agaggagaggaattcatagtagaaggcgaagtaataccagtagacccagaaagtggcgag
atgagaccatttcaggaacttatgcataggaagaggaaatcagatatacatgaggcaata
aaagaataccccgtaaatgtgtttttatttgatctaatgtactatgagggcgaggattat
acagtcaagcccttaccagagagaaggaagaaactagaatcaatattatcacagaatgat
aagattcatattgcaactcatataattgtggataacactgataaacttaaggaattcttc
tatcaagctatatcagaaggtgcagagggtgttatgctaaaatctatttctaatgattca
atctatcaagctggatctagagggtggttatggattaaatttaagagagattatcagagc
gaaatggcagatactgtagaccttgttttagtcggtgcgttttatggtaaaggaaagaaa
ggtggtaaatatagttctttccttatggcagcatataatcctgataaggatgtatttgaa
accgtatgcaaagtagcttctggatttactgatgaagaactagataacttgcaaaagaaa
attgaagaactaaaaagatctgataaacatcctagagtagattccgagatgattcctgat
gtatgggttactccatcattagtagctgaaataataggtgctgagataactatctctcca
ttacatacttgttgtaaagataattatgagaaaggtggactctctgtaagatttccaaga
tttataagatggagaccagataaaagcccagaagacgcaacaacttctaaggagatctat
gagatgtataattcacagctaaagaagattgatgacaaaactagtgagaatatctaa

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