Acidobacterium capsulatum: ACP_0897
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Entry
ACP_0897 CDS
T00868
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aca
Acidobacterium capsulatum
Brite
KEGG Orthology (KO) [BR:
aca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aca03016
]
ACP_0897 (truB)
Enzymes [BR:
aca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACP_0897 (truB)
Transfer RNA biogenesis [BR:
aca03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACP_0897 (truB)
Prokaryotic type
ACP_0897 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
MDMPI_N
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ACO31965
UniProt:
C1F2Z6
LinkDB
All DBs
Position
complement(1048549..1049490)
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AA seq
313 aa
AA seq
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MRHLSRAAPRAARSVLPLEARQVNGLLIVDKPGGITSHDVVARVRRATGEKSIGHLGTLD
PMATGVLPLLLGKFTRLAQYFGSSEKSYTGTIRFGFATDTYDAEGQPSSEPRPLTHSLEE
LRALAARFQGQIEQMPPPFSAKKIGGQPAYKAARAGETPQLRAVPVTIHEFVLESLAEDT
AAFRMQVSAGGYVRSVAHELGAAAGCGAHLASLRRTAAGAFTLAEALPLDEIECLAAAKE
LEARMPHPRAILPEMPAVTTDLQTAGRLRNGMQVNLPDFSTAPMVRIFVGQRDLIAIGRR
VAGTLFQPVAVLG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
ttgaggcatctgagccgggccgcaccgcgtgcggcccgctctgttttgccgttggaagcg
aggcaagtgaacgggcttttgattgtcgataaacctgggggcatcacctctcatgacgtg
gtggcgcgcgtgcgccgggccacgggcgagaagtccattggccacctcggcacgctggac
cccatggcaaccggcgtgctgccgctgctgctgggcaaattcacgcggctggcgcaatat
tttggctccagcgaaaaatcctataccgggaccatacgcttcggcttcgcaaccgacacg
tatgacgccgaagggcagccctcaagcgagccgcggccactgacgcattctcttgaggag
ttgcgagccctggccgcgcgctttcaggggcagatcgagcagatgccgccgccattttcc
gcaaagaaaattgggggacagcccgcctacaaagccgcgcgcgcgggcgagacgccgcaa
ctgcgcgccgttccagtgaccattcatgagtttgtgctggagtctctcgccgaagacacg
gcggcctttcgcatgcaggtctcggccggaggttatgtgcgttcggtggcgcatgagtta
ggcgcggctgccggttgcggagcgcacctggccagcctgcgccgtacggcggcgggtgcg
ttcacactggctgaggccctaccactcgatgagatcgaatgtctggccgccgcgaaggaa
ctggaagcgcgcatgccgcatcctcgcgccattttgcccgagatgccggccgtgaccacg
gacctgcagacagcgggccgtttgcgcaacggcatgcaggtcaatctgccggatttctcg
acggctccgatggtgcgtatctttgtcggccagcgcgacctgattgcgattggccggcgc
gtggcgggcacgctctttcagccggtggccgtgctggggtga
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