Actinoalloteichus fjordicus: UA74_09495
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Entry
UA74_09495 CDS
T04639
Name
(GenBank) putative hydrolase of the metallo-beta-lactamase superfamily
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
acad
Actinoalloteichus fjordicus
Pathway
acad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UA74_09495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acad03019
]
UA74_09495
Messenger RNA biogenesis [BR:
acad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
UA74_09495
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B_2
RMMBL
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
APU13962
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Position
2117409..2119100
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AA seq
563 aa
AA seq
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MTLTATDQRGAPGPLPEGALRIVALGGIGEIGKNMTVFEYDGRLLIVDCGVLFPEDDSPG
VDLILPDFRAIEDRIDDIEALVLTHGHEDHIGAVPFLLRLRPDLPVIGSRFTLALLAAKC
KEHRQVPRLQEVKEGEHTRHGAFQCEFFAVNHSIPDALAVAIRTPAGTVLHTGDIKLDQL
PLDGRLTDLAGFSRLGDEGVDLALVDSTNAEVPGFVPLERDIGPVLDGVIGKATQRVIVA
CFASHVHRVQQVLDVAVAHRRRVAFVGRSMVRNMGIAVDLGLIKVPEGLLIDLDEALQLP
ESKVLLVSTGSQGEPLSALSRMARGDHRQISIRAGDTVVLASSLIPGNETAVFGVVNGLV
RLGAQIVHQANAKVHVSGHASAGELLYLYNALRPSNVMPVHGEWRHLRANAALAEATGVP
ASRTVIAEDGVVVDLIDGIVQIAGRVEIGHVYVDGLSVGDVGESTLSDRLVLGEGGFISI
TVAIDSATGRAVAPPTVSGRGFSDDPKALDEVVALVESELSRTEVEGITDPHRVAQAVRR
VVGRWVAATYRRRPMIIPTVLPV
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtgacactgacggcaacggatcagcgcggagcccccggcccgcttcccgagggcgccctg
cgcatcgtcgcgctcggcggcatcggcgagatcggcaagaacatgaccgtcttcgaatac
gacggtcggctcctgatcgtggactgcggagtcctgttccccgaggacgactcgccgggg
gtggacctgatcctgccggacttccgcgccatcgaggaccggatcgacgacatcgaggcg
ctcgtcctcactcacggccacgaggaccacatcggggcggtgccgttcctgctgaggctg
cgtcccgacctgccggtgatcggttcccgattcaccctcgcgctgctggccgccaagtgc
aaggagcaccgacaggtgccccggctccaggaggtcaaggagggcgagcacacccggcac
ggcgccttccagtgcgagttcttcgccgtgaaccactcgatcccggacgcgttggcggtc
gcgatccgcacgcctgcgggaacggtgctgcacaccggagacatcaagctagaccagctg
ccgctggacggacggctcaccgacctggccgggttctcccggctgggtgacgaaggcgtc
gacctcgccctggtggactccaccaatgccgaggtccccggcttcgtcccgctggagcgc
gacatcggcccggtcctggacggggtcatcggcaaggcgacccagcgggtcatcgtcgcc
tgcttcgcgagccacgtgcaccgggtccagcaggtgctcgacgtcgccgtcgcgcatcgc
aggcgggtcgcgttcgtgggtcgttcgatggtgcgcaacatgggcatcgccgtcgacctc
ggactgatcaaggtgccggaaggcctgctgatcgacctggacgaggccctgcagctcccg
gagagcaaggtgctgctggtgtccaccggctcgcagggcgagccgttgtcggccctgtcg
cggatggccaggggcgaccatcgacagatctccattcgcgcaggcgacaccgtggtgctc
gccagctccctgatccccggcaacgagaccgccgtgttcggcgtggtcaacgggctggtg
cgcctcggcgcgcagatcgtgcaccaggcgaacgccaaggtgcacgtctccgggcacgcc
tcggcgggcgagctgctgtacctctacaacgcgctgcgcccgagcaacgtgatgccggtc
cacggcgagtggcgacacctgcgggccaacgccgcactggccgaggcgaccggagtgccc
gcgagccgcaccgtgatcgcggaggacggcgtggtcgtcgacctgatcgacggcatcgtg
cagatcgcgggccgagtggagatcggacacgtctacgtggacgggctctcggtcggcgac
gtcggcgagtcgacgctgtcggatcgtctcgtcctcggcgagggcggcttcatctccatc
accgtcgcgatcgacagcgccaccggtcgcgccgtcgccccgccgaccgtgtcgggtcgc
gggttctccgacgaccccaaggccctggacgaggtcgtcgcgctggtggagtcggagctg
tcgcgcaccgaggtcgagggcatcaccgatccgcaccgcgtcgcccaggcggtgcgccgg
gtcgtcggtcgctgggtggccgccacctaccgccgcaggccgatgatcatccccacggtg
ctgccggtctga
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