Acinetobacter calcoaceticus: BUM88_14015
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Entry
BUM88_14015 CDS
T05452
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
acal
Acinetobacter calcoaceticus
Pathway
acal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BUM88_14015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acal03400
]
BUM88_14015
DNA repair and recombination proteins [BR:
acal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BUM88_14015
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BUM88_14015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
Kinesin
AAA_30
AAA_5
SWI2_SNF2
AAA_22
AAA
Microtub_bd
Zot
DUF87
Motif
Other DBs
NCBI-ProteinID:
AQZ82641
UniProt:
A0A0A8XAM5
LinkDB
All DBs
Position
complement(2899868..2901889)
Genome browser
AA seq
673 aa
AA seq
DB search
MNENQPFDLVTHYQPAGDQPQAIEKLVNGIEHGFRNQLLLGVTGSGKTYTMANVIAQTQR
PTIVMAHNKTLAAQLYGEFKSFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSAINDH
IDQMRLSATRALLERRDAIIVASVSAIYGLGDPNAYMQMLLHVVEGDRVSRDEIIRRLVE
MQYTRNELEFLRGTYRIRGEIIDIFPAESDQHAIRIELFDDEVDSIRWFDPLTGKMVRKV
SRITIYPKSHYVTPKDHLTRAIDTIKDELQDQLKFFREHDKLLEAQRIEQRTRYDLEMMQ
QLGYTNGIENYSRHLSGRPSGEAPPTLFDYIPEDALLIIDESHVTVPQIGAMYKGDRSRK
ENLVNYGFRLPSALDNRPMKFEEWERIVPTTIFVSATPAKYELEKSDQIVEQVVRPTGLI
DPEIEIRPVLTQVDDVLSEINIRKNLNERVLITTLTKRMAEDLTSYLKEYGVKVAYLHSD
IDTVERVKIIHELRTGIFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNVKGKAILYADRITDSMQKAIDETDRRRAKQIEFNELHGITPRSAVRQVVKEIDS
GEVLSDDEIDEKVLEQAQALSADERHILSDPKLFSKHITKLEKDMLKASKDLQFEQAARI
RDEIIRLKAQMLQ
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgaaaatcaaccttttgatttggtcactcattatcagccagcaggtgatcagcca
caggcaattgaaaagctggtcaatggtatcgagcatggttttcgtaatcagttattgcta
ggggtaacgggctcaggtaagacctataccatggcaaatgtgatcgcccaaacgcagcga
cctacaattgtgatggcccacaacaaaactttggctgcccagctttatggtgagtttaaa
tctttcttccctaataatgcggttgaatattttgtaagttattacgattactaccaacca
gaagcttacgttccatcttcggatacgtttattgaaaaagattcagccattaatgatcac
attgatcagatgcggttatcagcaacacgggctttattagaacgtcgtgatgcaattatt
gtggcatcggtttctgcaatttatggtttgggtgatccgaatgcttatatgcaaatgttg
ctgcatgtggttgagggcgaccgagtaagccgcgatgaaatcatccgccgattggttgaa
atgcaatatacgcgtaatgaacttgaatttttacgtggtacttatcgtattcgcggtgaa
attattgatattttcccagcggaatctgatcaacacgcgattcgtattgaactatttgat
gatgaggtcgattcaatccgttggtttgacccgctaactggtaaaatggttcgtaaagtt
tctcggataacgatttatccgaaaagccactatgtaacaccaaaagatcatttgacccgt
gctatcgatacaattaaagatgaattacaagatcagctcaaattcttccgtgaacatgac
aaattgcttgaagcacaacgtattgagcaacggacacgttacgatctggaaatgatgcaa
cagttgggttataccaatggtatcgaaaattattcgcgtcatttgtcaggacgcccgtct
ggtgaagcaccgccgactttattcgactatattccagaagatgctttgctcattattgac
gaatcacacgttaccgttccgcaaattggagcgatgtataaaggtgaccggtcacgtaaa
gaaaacttagtgaattatgggttccgtttgccaagtgcgcttgataaccgtccaatgaaa
tttgaagagtgggagcgtattgtaccgacgaccatttttgtaagtgcaacacctgctaaa
tatgaattagaaaagtcagatcaaatcgttgaacaagtggtacgtccaacaggtctaatc
gaccctgaaattgagattcgtcctgtcttaacccaagtagatgatgttctttctgaaatt
aatattcgtaagaacttgaatgaacgggtattaattaccactttaacaaagcgtatggca
gaagacctgacttcttatttaaaagaatatggcgttaaggtcgcttatctccactcagat
attgatacagttgaacgtgtcaaaattattcatgaactacgtacaggtatatttgatgtt
ttagtcggcattaacctgctacgtgaaggtctggatatgccggaagtttctttggttgct
attttagatgcagataaagaaggctttttacgttcagaacgctcactcattcagacgatt
ggtcgtgctgcgcgtaatgtgaaaggtaaagcaattttatatgctgaccgaattaccgat
tctatgcaaaaagcaatagatgaaactgatcgtcgtagagccaaacaaattgaatttaat
gagttgcatggtattacgccacgtagtgctgttcgtcaggttgtcaaagaaattgactcg
ggtgaggtactttcagacgacgagattgatgaaaaagtacttgaacaagcacaagcattg
agtgccgatgaaagacatattctttcagatcctaaactgtttagtaaacatattactaag
cttgaaaaagatatgctaaaggcctcgaaagatttacagttcgagcaagcagcgcggata
cgtgatgaaatcattcgattaaaagcgcaaatgttgcaataa
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integrated database retrieval system
