Aeromonas caviae: VI35_18835
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Entry
VI35_18835 CDS
T05190
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
acav
Aeromonas caviae
Brite
KEGG Orthology (KO) [BR:
acav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acav03009
]
VI35_18835
Enzymes [BR:
acav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
VI35_18835
Ribosome biogenesis [BR:
acav03009
]
Prokaryotic type
rRNA helicases
VI35_18835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
P-loop_SecA
AAA_19
AAA_22
T6SS_VasJ
Motif
Other DBs
NCBI-ProteinID:
ATP91862
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All DBs
Position
4065091..4066470
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AA seq
459 aa
AA seq
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MNNSEFSSLNLSSALQDNLASLGYLQMTPIQAQSLPLVLDGKDLIAKAKTGSGKTAAFGL
GLLAKLDVNRLAVQALVLCPTRELADQVATEIRRLARTLPNVKLVTLCGGTPTAPQSATL
GFGAHIAVGTPGRILKHLEQGTLELDDLKTLVLDEADRMLDMGFGEDINRVISHAPRDRQ
TLLFSATYPEGIAQMSRGVQRNPVEVSVESLHEESAIEQKLYEVPAGQRLDALTWLLSHY
QPGSCVVFCNTKRACNDVADHLAAKGFSALALNGDLEQRERDQVLVRFANGSATILVATD
VAARGLDIKELGAVINYELTYDPEVHVHRIGRTGRAGQQGLALSLYQPNEAQRVNFIEEY
QQAPIPQGDLAGIGRDIKPIAPQMVTLSIDAGRKSKVRAGDILGALTGEGGIAGADVGKI
QISEQYSYVAVKRQVASAALKRLQEGKIKGRSYRARKLG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaacagcgaatttagcagcctgaacctctcctccgccctgcaggacaacctcgcc
agcctgggctatctgcagatgaccccgatccaggcccagagcctgcccctggtgctcgac
ggcaaagatttgatcgccaaggcgaaaaccggcagcggcaagaccgcggccttcggcctg
ggtctgctggccaagctggacgtcaaccggctggccgtgcaggcgctggtgctctgtccg
acccgcgagctggcggatcaggtggccaccgagatccgccgtctcgcccgcaccctgccc
aacgtcaagctggtgaccctgtgcggcggcaccccgaccgcaccgcaatccgccaccctg
ggctttggcgcccacatcgccgtcggcaccccgggccggatcctcaagcacctggagcag
ggcacccttgagctcgacgacctcaagacgctggtgctggacgaagcggatcgcatgctg
gacatgggctttggcgaagacatcaaccgcgtcatcagccacgccccgcgggatcgccag
accctgctgttctccgccacctatccggaagggatcgcccagatgagccgcggcgtgcaa
cgcaacccggtggaggtgagcgtggagtccctgcatgaagagagcgccatcgaacagaag
ctgtatgaagtgccggccggccagcgcctcgatgccctcacctggctgctcagccactac
cagccgggctcctgcgtggtgttctgcaacaccaagcgcgcctgcaacgacgtggccgat
cacctggccgccaagggcttctcggcgctggcgctgaacggcgatctggagcagcgtgag
cgggatcaggtgctggtgcgcttcgccaacggcagcgccaccatactggtcgccaccgac
gtggcggcccgcggcctcgacatcaaggagctcggcgccgtcatcaactacgagctgacc
tacgaccccgaggtgcacgtgcaccgcatcggccgtaccggccgcgctggccagcagggc
ctggccctgagcctctaccagccgaacgaggcccagcgcgtcaacttcatcgaggagtac
cagcaggcccccattccccagggcgacctggccgggatcggccgcgacatcaagccgatc
gcgccgcagatggtgaccctctccatcgatgcgggccgcaagagcaaggtgcgtgccggt
gacatcctcggcgccctgaccggcgaaggcggcattgccggggccgatgtgggcaagatc
cagatttccgagcagtactcctacgtggcggtgaagcgccaggtggcgagcgccgccctc
aagcggttgcaggaaggcaagatcaaggggcgcagctaccgtgcccgcaaactgggctaa
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