Atta cephalotes (leaf cutting ant): 105619674
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Entry
105619674 CDS
T04923
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105619674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acep03019
]
105619674
Enzymes [BR:
acep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
105619674
Messenger RNA biogenesis [BR:
acep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105619674
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105619674
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
105619674
NCBI-ProteinID:
XP_012056583
UniProt:
A0A158NGC5
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MTQQIRRAPRLSHPVFNPLFGNNSTRFIEAARAGMCVPFLASLLPTMSAECVPQITVEPV
ITVSKKRTLTANHPPQRPWIPLTRPNRTRPTCIFTVMCYNVLCDKYATRQMYGYCPSWAL
DWEYRKKGILDEIRHYAADIISLQEVETDQFYNFFLPELKHDGYDGIFSPKSRAKTMAEN
DRKYVDGCAIFYRTAKFSLIKEHLVEFNQLAMANAEGSDNMLNRVMPKDNIGLAALLRTK
EAAWDNGVPSDPAQVQQPILVCTAHIHWDPEFCDVKLIQTMMLSNELRSILDQAGQSFRP
GHKPDSSNVQLLLCGDFNSLPDSGVIEFLTSGRVAADHRDFKDLAYKSCLQKISGCDKPN
EFTHSFKLASAYSEDIMPYTNYTFEFKGIIDYIFYSKQSMVPLGLLGPLSPEWFKEHKVV
GCPHPHVPSDHFPLLVELEMTPTVGTSNGLISRR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaacaaatacgacgagctccccggctttcgcatccggtatttaatccgctattc
ggtaacaattcaacgcgttttatcgaggccgccagggcgggaatgtgtgttccattcctg
gcttcgctactgcctacgatgtccgccgagtgcgtgccacaaattaccgtcgagccagta
attaccgtcagcaaaaagcgaactcttacggccaatcatccgccccaaagaccatggatt
ccattgacgaggcccaataggacaagaccaacatgtatattcacggtgatgtgctacaac
gtgctgtgcgacaagtatgcgacgcggcagatgtacggctattgcccgagctgggcgctg
gattgggagtatcgaaaaaagggtatcctcgacgagatacggcactacgctgcggacatc
atcagcctgcaggaggtcgagacggaccaattctacaacttcttcctgccggagctcaag
cacgacggttacgacggcatattctcacccaagtcccgcgcgaagacgatggcggagaac
gatcgcaagtacgtcgacggctgcgccattttttacaggaccgccaaattttctttaata
aaggagcatttagttgaattcaatcaattggcaatggcaaacgcggagggttcagacaac
atgttaaatcgtgttatgccaaaagacaacattggattggctgcattacttaggactaag
gaagccgcttgggataacggtgttccatctgacccagcacaagtgcaacaaccaatttta
gtttgtacggcgcacattcattgggatcccgagttctgcgatgtaaaactaatacagacg
atgatgctgagcaatgaattacgttccattttggaccaagctggccagtctttcagaccc
ggccacaagcctgactcttccaacgttcaactgttgctttgtggcgacttcaattcttta
cctgattctggtgtgatcgagtttcttacatccggacgcgtggcggccgatcatcgtgat
tttaaggatttagcatataaatcgtgtttacaaaagatctctggctgcgataaacccaac
gaattcacgcattctttcaagcttgcatccgcctacagtgaggacattatgccctacacc
aactacacattcgaatttaaaggcataatagattacattttctattcgaaacaaagtatg
gtgccgctgggcctcttgggtccattgagcccagaatggtttaaagagcataaagtggta
ggatgtcctcatcctcatgttccatcggatcactttcctctgttagtggagttagagatg
acaccgacagtaggaacaagcaacggtttgatctcacgcaggtag
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