Acetobacter sp. JWB: DS739_10490
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Entry
DS739_10490 CDS
T05544
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
acet
Acetobacter sp. JWB
Pathway
acet03410
Base excision repair
acet03430
Mismatch repair
acet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DS739_10490 (recJ)
03430 Mismatch repair
DS739_10490 (recJ)
03440 Homologous recombination
DS739_10490 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acet03400
]
DS739_10490 (recJ)
DNA repair and recombination proteins [BR:
acet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DS739_10490 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DS739_10490 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DS739_10490 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
RecJ_OB
DHH
CDC45
DNA_pol_A
Motif
Other DBs
NCBI-ProteinID:
AXC27136
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Position
2217655..2219487
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AA seq
610 aa
AA seq
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MQSSTLQLTEQPEETSTPAVLGVEASFVGRRWVWRAGAEDPALMRLGAALAQQLGIPEIV
GRLLAMRQITPDQAPHFLEPKLRALMPDPSTLTDMDKVAARMAKAVQNREVIGIFGDYDV
DGACASAILASFFEELGCTVHTHIPDRMTEGYGPNVAALDNLVAQGASILICVDCGTASA
DILCQMTDKADVIVLDHHKSEDALPPILATVNPNRPDCPSGLHHICAAALAFLAAVATTR
DLRRADWFTANQPPPDLMRQLDLVALATVCDVMPLHGLNRAFVTQGLKIMARRQRTGLNA
LMEIAGVTKAPDAFSCGFALGPRINAGGRIAEAALGLRLLRCPDNFEARQMAERLDAVNR
RRQGVEADILDLAMQQAEAQKKAGHAVIMLAGKDWHPGVVGIVAGRIKERFNRPALVGAE
QEDGTIKGSGRSVPGLDLGTVIIAARQAGMLKTGGGHAMAAGFSLTADKLEEFHTFLDTR
LAQAATLPEKVPLTVDAVVAISGATAELAQDMGALAPFGAGNPEPLLAIPRVTVIRADRI
GRDGNTLRLLLKGENNGRLKALLFRAHENPLAAKLEDTTRPALHLAGYLRAESWNGRTDA
TFFIQDAAAA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcagcaccttgcaacttaccgaacaaccagaagaaacttccacgcctgctgta
ttaggggtggaagccagctttgttgggcggcgttgggtttggcgtgccggggcagaagat
cctgccctgatgcgtctgggggctgctttggctcaacaactgggtattccagaaattgtt
ggccgtttgctggccatgcgccagattaccccggatcaagcccctcattttctggaaccc
aagttgcgggcacttatgcccgatccttccactctcacggatatggataaggttgctgcc
cgcatggcaaaagctgtccagaatcgtgaagtaattgggatttttggtgattatgacgtg
gatggcgcctgcgcctccgccattcttgcctctttttttgaagaactcggctgcaccgtt
catacccatattccagacagaatgaccgaaggatatggccctaacgtagccgcactggat
aatttggtggcgcagggcgcttccatattgatttgtgtggattgcggcaccgcttcggca
gatattttgtgtcagatgacagacaaagccgatgtgattgtgctggatcatcacaaatcg
gaagatgcccttccccctattctggcaacggtcaaccctaaccggccagactgcccctct
ggcctgcatcatatttgcgcagcagcccttgcctttcttgccgcagttgccactacgaga
gatctgaggcgtgcagactggtttacagcaaaccagcctccgcccgatcttatgcgccag
cttgatctggtggctttggcaacggtttgtgatgttatgccactgcatgggcttaaccgt
gcgtttgtaacgcaagggcttaaaattatggcccgccgccaacgtactggcctgaatgca
cttatggaaattgctggcgttaccaaagcaccagatgctttttcctgcggctttgcgtta
gggcctcgtattaatgcgggtggccgtattgcagaagcagccttaggcctccgcctgctg
cgttgcccagataactttgaagcacgccagatggccgaacgtctggatgccgtaaaccgc
cgtagacaaggtgttgaggccgatattctggatcttgccatgcaacaggcagaagctcag
aaaaaagccggacacgctgttattatgctagcggggaaagattggcatcccggtgttgtc
ggtattgtagcggggcgtattaaggaacggttcaatcgccctgcccttgtaggcgcagaa
caagaagatggcacgattaaaggttctggccgctctgttcccggcttagatcttggcacc
gtgattattgcagcccgtcaggcaggtatgttgaaaaccggtgggggccatgccatggct
gctggtttttcccttacagcagataagctggaagaatttcatacctttctagatactcgg
ttggcacaggctgccacgcttccagaaaaagtgccgcttacagtagatgcggtggtggcc
atttctggcgccacggctgaattagcgcaagacatgggtgcccttgcaccgtttggtgct
ggaaacccagaacctctgctggccataccacgcgtaacagttatacgtgcagatcgcatt
ggccgcgatggcaatacgctgcgtctgcttttaaagggtgaaaataacggccggttgaaa
gcgcttctgttccgcgcccatgaaaacccactcgcggccaaactggaagatacaacacgc
ccggccctgcatcttgcagggtatttgcgggcagaaagctggaacggcagaacagacgcc
acatttttcattcaagacgctgcggctgcctga
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