Acetobacter sp. JWB: DS739_12740
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Entry
DS739_12740 CDS
T05544
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
acet
Acetobacter sp. JWB
Pathway
acet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DS739_12740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acet03400
]
DS739_12740
Enzymes [BR:
acet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DS739_12740
DNA repair and recombination proteins [BR:
acet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DS739_12740
RecFOR pathway proteins
DS739_12740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
AAA_22
AAA_3
Mg_chelatase
nSTAND3
Rad17
TsaE
AAA_14
AAA_18
NB-ARC
AAA_2
AAA_33
NACHT
DUF815
NTPase_1
RNA_helicase
AAA_17
AAA_24
AAA_28
Bac_DnaA
Cytidylate_kin
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AXC27520
LinkDB
All DBs
Position
complement(2698980..2700056)
Genome browser
AA seq
358 aa
AA seq
DB search
MSAEFTPDREIDAARREEDVGESTLRPQTLHDFTGQKASRENLSIFIKAAKQRGDALDHV
LLHGPPGLGKTTLAQIVARELGVGFRATSGPVIQRAGDLAAILTNLQPRDVLFIDEIHRL
QPAIEEILYPAMEDFQLDLIIGEGPAARSVRIDLPPFTLVAATTRAGLLATPLRDRFGIP
LRLVFYTPEELCKIVARGAEKLDFALTQGGAMEIARRSRGTPRIAGRLLRRVRDFASVTV
PVGVPVETEVADAALKRLEVDALGLDAMDRRYLRRIAEYHHGGPVGVETLAAALAESRDT
LEDVIEPYLIQEGLVLRTTRGRVLGERGWRHLGLTPPASATGGNQQMDFLAGEDEGEE
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggagtttacgcctgatcgggaaattgatgcagcacggcgggaggaagatgtt
ggcgaatccacacttcgcccgcaaactctgcatgattttacaggccagaaggccagtcgg
gaaaatctttccatctttatcaaggccgccaaacagcgtggtgatgccttagatcatgtt
ctgctgcatgggccgccggggttgggtaaaacaaccttggcccagattgttgcgcgcgaa
ctgggggtgggttttcgggccacatctggccccgttatccagcgtgcgggtgatctggca
gcaattcttaccaacttacagcctcgcgatgtgctgtttattgatgaaatccatcgcctt
cagcccgctattgaggaaattctctatcctgcgatggaagatttccagcttgatctgatt
attggtgagggcccggctgcgcggtctgtccgtattgatctgccgccctttacgcttgtg
gcagctaccacgcgcgcaggccttttggccacgccattgcgggacaggtttggtattccc
cttcggctggttttttatacgccggaagaactgtgtaaaattgtggcacgaggggcagaa
aagctggattttgcccttacgcaaggtggcgcaatggaaattgcccgtcgttcacgcggt
acgccacgtattgccgggcggttgctgcgccgagtgcgggattttgcatctgtaaccgtg
cctgtcggggtgcctgtagaaacggaagtagcggatgcggctctcaagcggctagaggtt
gatgcacttgggctggatgccatggataggcgctatctgcgccggattgccgaatatcat
catggtggccctgtcggggtggaaacgctggcggcagctctggccgaatcgcgcgataca
ttggaagatgtcattgaaccttacctgatccaggaaggtcttgttctgcgtaccacccgc
ggtcgtgttcttggtgaacgcggctggcggcatctggggcttactcctccggcttcggct
acggggggcaaccagcaaatggattttcttgcaggcgaggatgagggggaagaatga
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