Achromobacter sp. B7: DVB37_06835
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Entry
DVB37_06835 CDS
T05703
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
achb
Achromobacter sp. B7
Pathway
achb00540
Lipopolysaccharide biosynthesis
achb01100
Metabolic pathways
achb01250
Biosynthesis of nucleotide sugars
Module
achb_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
achb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
DVB37_06835 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
achb01005
]
DVB37_06835 (rfaD)
Enzymes [BR:
achb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
DVB37_06835 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
achb01005
]
Core region
DVB37_06835 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
AYD63670
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Position
1529111..1530100
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AA seq
329 aa
AA seq
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MIVVTGAAGFIGSNLVRGLNRRGIHDIIAVDDLTEGDKFVNLVDCQIAEYMDKDDFRRRV
ADGSLPAVRAVLHQGACSDTTERNGRYMMDNNYRVTLELFEFCQTRRIPFLYASSAAVYG
GSSVYVEDPANEGPLNVYGYSKLLFDQVLRKRMDSLTAQVVGLRYFNVYGPHEQHKGRMA
SVAFHNMNQFLEHGHVRLFAGWDGYVDGGQSRDFISVEDVVAVNLHFLDHPDQSGIFNCG
TGRAQPFNDVAAAVVNTLRAERGEAELTLAQLVELDLIRYIPFPEDLKGRYQSYTQADVT
QLRTAGFHAPMRDVQTGVAEYVRYWRARR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgtaaccggagccgcgggcttcatcggcagcaacctggtgcgcgggcttaac
cgccgtggcatccatgacatcatcgcggtcgacgacctgaccgaaggcgacaagttcgtc
aacctggtcgactgccagatcgccgagtacatggacaaggacgacttccgccgccgcgtg
gccgacggcagcctgcccgccgtgcgcgcggtgttgcatcagggcgcctgctcggacacc
accgagcgcaacggccgctacatgatggacaacaactaccgcgtcacgcttgaactgttc
gagttctgccagacgcgacgcattcccttcctgtatgcctcgtccgccgccgtctatggc
ggctcgtccgtctacgtcgaggacccggccaacgaagggccgctgaacgtctacgggtac
tccaagctgttgttcgatcaggtattgcgcaagcgcatggacagcctgaccgcgcaggtg
gtcggcctgcgttatttcaacgtttatggtccgcacgaacagcacaagggccgcatggcc
tcggtggcgttccacaacatgaaccagtttctggaacacggccatgtgcgtctgttcgcg
ggctgggacggttatgtggacggtggccaaagccgcgatttcatctcggttgaagacgtc
gtggcggtcaacctgcattttctggaccatcccgatcaatccggcatcttcaattgcggc
acgggtcgggcgcagcccttcaatgacgtggccgctgccgtggtgaacacgttgcgtgcc
gaacgcggcgaggccgagctgacgttggcgcagttggtcgagctggatctgatccgctac
atcccgttcccggaagacctgaagggccgctaccaaagctatacgcaggcggacgtcacc
cagctgcgcaccgccggcttccatgcgccgatgcgagacgtgcagactggtgttgccgag
tacgtgcgctactggcgcgcacgccgctga
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