Acidovorax carolinensis NA2: CBP33_01645
Help
Entry
CBP33_01645 CDS
T04914
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
acid
Acidovorax carolinensis NA2
Pathway
acid03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acid00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CBP33_01645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acid03021
]
CBP33_01645
03400 DNA repair and recombination proteins [BR:
acid03400
]
CBP33_01645
Enzymes [BR:
acid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CBP33_01645
Transcription machinery [BR:
acid03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CBP33_01645
DNA repair and recombination proteins [BR:
acid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CBP33_01645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
DUF5887
Motif
Other DBs
NCBI-ProteinID:
ART46986
UniProt:
A0A247D3R8
LinkDB
All DBs
Position
326313..330425
Genome browser
AA seq
1370 aa
AA seq
DB search
MAYSYTERKRIRKSFGTRDSVLEVPYLLQMQKDAYTAFLQADKAPQKRTIEGLQAAFDAA
FPIVSHNGFVEMKFIEYNLAKPAFDVRECQTRGLTFASAVRAKVQLIIYDRESSTSQSKV
VKEVKEQEVYMGEVPLMTDKGSFIINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFS
ARIIPYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKAIGLNPESILANFFVNDNFRLM
DSGAQMEFVSERLRGEVARFDITDKSGKVVVAKDKRVTARHTRELEQSGTTHISVPEDFL
IGRVVARNIVDADTGEIIAKANDELTEALLKKLRSAGVQDVQCIYTNELDQGAYMSHTLR
IDETVDEFAARVAIYRMMRPGEPPTEDAVQALFQRLFYNPDTYDLSRVGRMKFNAKIGRD
ESTGPMVLSNEDILAVVKILVDLRNGNGEVDDIDHLGNRRVRCVGELAENQYRTGLARIE
KAVKERLGQAEQEPLMPHDLINSKPISAALKEFFGASQLSQFMDQTNPLAEITHKRRVSA
LGPGGLTRERAGFEVRDVHVTHYGRVCPIETPEGPNIGLINSLALYARLNEYGFIETPYR
RVVDGKVTNDIDYLSAIEEGKYVIAQANAVLDKDGRLTGELVSAREKGESILCGADRVQY
MDVSPAQIVSVAASLVPFLEHDDANRALMGANMSRQAVPVLRPEKPLVGTGIERVAAVDS
GTVVTATRGGIVDYVDATRIVVRVNDAEALAGEVGVDIYNLIKYQRSNQNTNIHQRPIVK
KGDALVKGDVIADGASTDFGEIAIGQNMLIAFMPWNGYNFEDSILISERVVSEDRYTSIH
IEELVVMARDTKLGAEEITRDIPNLSEQQLNRLDESGIIYVGAEVQPGDTLVGKVTPKGE
TTLTPEEKLLRAIFGEKASDVKDTSLRVDQGSQGTVIDVQVFTREGIQRDKRAQQIIDDE
LKRFRLDLNDQLRIVEADAFDRIEKLLNGRVANGGPQKLAKGTKIDKAYLASVEKFHWFD
IRPAEDEVATQLESIKNSLEQTRHSFDLAFEEKRKKLTQGDELPAGVLKMVKVYLAVKRR
LQPGDKMAGRHGNKGVVSKIVPVEDMPYMADGTPADIVLNPLGVPSRMNIGQVLEVHLGW
AGKGIGQRIGDMLQQEAKASELRKFLEEVYNSRGRTEDLSQLSDDDLMAMAANLTNGVPY
ATPVFDGASEDEIKAMLKLAYPDDLAERKGLTPERTQAYLFDGRTGDRFERPTTIGYMHY
LKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYVLQEMLT
VKSDDVVGRTKVYESIVKGEHAIEAGMPESFNVLVKEIRSLGLDIELERS
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atggcctattcctataccgaacgcaagcgaattcgcaaaagtttcggcacccgcgatagc
gtgctcgaagttccttatctgctgcagatgcagaaggacgcatacaccgctttcctgcag
gctgataaagcaccccagaaaagaaccatcgaaggccttcaggctgcattcgacgctgcc
ttccccatcgtctcccacaacggttttgtggagatgaagttcatcgagtacaacctggcc
aagcccgcatttgacgtgcgcgagtgccagacgcgcggtctgacctttgcgtcggccgtg
cgggccaaggttcagctgatcatctatgaccgcgaatcctcgacctcgcagtccaaggtg
gtcaaggaagtgaaggagcaagaggtctacatgggcgaagtgccgctcatgaccgacaag
ggctcgttcatcatcaacggcaccgagcgcgtgattgtctcgcagctgcaccgttcgcct
ggcgtgtttttcgagcacgacaagggcaagacccacagttcgggcaagctgctgttctcg
gcacgcatcattccttaccgcggctcgtggctcgacttcgagttcgaccccaaggacatc
ctgtacttccgcgtcgaccgtcgtcgcaagatgcctgtcacgatcctgctcaaggccatc
ggtctgaacccggaatcgatcctggcgaacttcttcgtcaatgacaacttccgcctgatg
gacagtggcgcacaaatggagtttgtgtccgagcgcctgcgtggtgaagtggcccgtttt
gacatcaccgacaagtccggcaaggtcgtcgtggccaaggacaagcgcgtgacggctcgc
cacacccgtgaactggagcagtccggcaccacgcacatcagcgtgcctgaagacttcctt
attggccgtgttgtggcccgcaacatcgtggatgcggacaccggcgaaatcatcgccaag
gcgaatgacgaactgaccgaagcgctgctcaagaagttgcgcagcgccggcgtgcaggac
gtacagtgcatctacaccaatgaactcgaccagggcgcgtatatgtcgcacaccctgcgg
atcgacgaaacggtggacgagtttgccgcccgcgtggccatctaccgcatgatgcgtccc
ggcgaaccgcccacggaagacgctgtgcaggccctgttccagcgcctgttctacaacccc
gatacgtacgacctgtcgcgcgtgggccgcatgaagttcaacgccaagattggccgcgac
gaatccaccggtcccatggtgttgtccaacgaggacatcctggccgtggtcaagatcctg
gtggacctgcgcaacggcaacggtgaagtcgatgacatcgatcacctgggcaaccgccgc
gtgcgctgcgtgggcgaactggccgaaaaccagtaccgcacaggccttgcacgaatcgaa
aaagcggtgaaggaacgtctgggtcaggccgagcaagagccgctgatgccgcacgacctg
atcaacagcaagccgatctcggctgcgctgaaggagttcttcggcgcctcgcagctgtcg
cagttcatggaccagaccaacccgctcgcagaaatcacgcacaagcgccgtgtttccgcc
ctgggcccaggtggtctgacgcgcgaacgcgccggttttgaagtgcgtgacgtgcacgtc
acgcactacggccgtgtctgccctattgaaacgcccgaaggcccgaacatcggcctgatc
aactcgctggccctgtatgcccgcctgaacgaatacggcttcatcgaaacgccgtaccgc
cgcgtggtggatggcaaggtcaccaacgacatcgattacctgtcggccatcgaagaaggc
aagtatgtgatcgcgcaggccaatgccgtgctcgacaaggacggtcgcctgaccggtgag
ctggtctctgcccgcgaaaagggtgaatccatcctgtgcggagcagaccgcgtgcagtac
atggatgtgtcgcccgcgcagatcgtgtcggtggcggcctcgctcgtaccgttcctggag
cacgacgatgcaaaccgcgcactgatgggcgccaacatgtcgcgccaggctgtgcctgtg
ctgcggcctgaaaagccactggtcggcacgggcatcgagcgcgtcgctgccgtggattcg
ggcaccgtggtcaccgccacccgtggcggtatcgtggactatgtcgatgcgacgcgcatc
gtggtgcgtgtgaacgacgcagaagccctggccggtgaagtgggtgtggatatctacaac
ctcatcaagtaccagcgctccaaccagaacaccaacatccaccagcgccccatcgtcaag
aagggcgatgcactggtcaagggtgatgtgattgccgacggtgcatcgacggacttcggc
gaaatcgccatcggccagaacatgctcatcgcgttcatgccctggaacggctacaacttc
gaagattcgatcctgatctccgagcgcgtcgtttccgaagaccgctacacctcgatccac
atcgaggagctcgtggtcatggcccgtgataccaagctgggcgccgaagaaatcacgcgc
gatatcccgaacctgagcgaacagcaactgaaccgcctggacgagtcgggcatcatctac
gtgggtgctgaagtgcagcccggcgatacgctggtcggcaaggtcactcccaagggcgag
accacgctcacgccggaagaaaagctgctgcgcgcgatctttggcgagaaggcttccgac
gtgaaggacacttcgctgcgcgtggaccagggctcgcaaggcaccgtgatcgacgtgcag
gtgttcacccgcgaaggtatccagcgcgacaagcgcgcccagcagatcatcgacgacgaa
ctcaagcgcttccgcctggacctgaacgaccagctgcgcatcgtcgaggccgatgccttc
gaccgcatcgagaagctgctgaacggacgtgtggccaacggtgggccgcagaagctggcc
aagggaacgaagatcgacaaggcctacctggcctcggtcgagaagttccactggttcgac
atccgccctgcagaagacgaagtcgccacgcagctcgagtccatcaagaactcgctggag
caaacgcgtcacagcttcgatctggctttcgaagaaaagcgcaagaagctcacgcagggc
gacgagttgcccgcgggcgtgctcaagatggtcaaggtgtatctggccgtcaagcgccgc
ctgcagccgggtgacaagatggcgggtcgccacggtaacaagggtgtggtgtccaagatc
gttccggtcgaagacatgccctacatggccgatggcacccctgccgacatcgttctgaac
ccgttgggcgtgccttcgcggatgaacatcggccaggttctggaggttcatctgggctgg
gccggcaagggcatcggtcagcgcattggtgacatgctgcagcaggaagccaaagcgtcc
gaactgcgcaagttcctcgaagaggtctacaactcgcgtggccgcactgaagacttgtcg
caactgagtgacgatgacctcatggccatggcagccaacctcacgaacggtgtgccgtat
gccacgcccgtgttcgacggtgcgtcggaagacgaaatcaaggcgatgctgaagctggct
taccccgatgatctggccgagcgcaagggtctgacccccgaacgcacccaagcctatctg
tttgacggccgcacgggtgaccgcttcgagcgccccaccaccatcggctacatgcattac
ctgaagctgcaccacctggtggacgacaagatgcacgcccgctcgaccggtccgtactcg
ctcgtcacccaacaaccgctgggcggcaaggcccagttcggtggtcagcgtttcggggaa
atggaagtgtgggcgttggaagcctacggcgccgcctatgtgctgcaggaaatgctgact
gtgaagtccgacgacgtggtgggccgtaccaaggtgtacgaatccatcgtcaagggcgaa
cacgccatcgaagccggcatgccggaatcgttcaacgtgctggtcaaggaaatccgttcg
ctgggcctggacatcgagctggaacgctcctaa
DBGET
integrated database retrieval system
