Acidipropionibacterium virtanenii: JS278_01173
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Entry
JS278_01173 CDS
T05538
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
acij
Acidipropionibacterium virtanenii
Brite
KEGG Orthology (KO) [BR:
acij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acij03019
]
JS278_01173 (orn)
03009 Ribosome biogenesis [BR:
acij03009
]
JS278_01173 (orn)
Messenger RNA biogenesis [BR:
acij03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JS278_01173 (orn)
Ribosome biogenesis [BR:
acij03009
]
Eukaryotic type
Pre-60S particles
RNases
JS278_01173 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AXE38352
UniProt:
A0A344USV4
LinkDB
All DBs
Position
complement(1291639..1292253)
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AA seq
204 aa
AA seq
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MLVWIDCEMTGLDLVHDGLIEVAALVTDGDLNVQGEGVDVIIKPQPAWLEHMNDFVRGMH
THSGLLDELDSGLSMDEAQAQVLNYIKTYVPEAGKAPLAGNTIGTDRSFLAKDMPELEGY
THYRNVDVSSIKELARRWYPGAFRHAPAKQGNHRALADIQESIEELMYWREALMVAAPGP
SSEKATEIAGKYQGLLTGSGREQA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgtggatcgactgcgagatgaccgggctcgacctggtccatgacggactgatc
gaggtcgccgccctggtgaccgacggcgatctcaacgtccagggtgagggggtcgacgtc
atcatcaagccccagccggcctggctggagcacatgaacgatttcgtgcgcggcatgcac
acccactccgggctgctcgacgagctggactctggattgagcatggatgaggcccaggcg
caggtcctgaactacatcaagacgtacgtgcccgaggccggcaaggccccgctggccggc
aacacgatcggcaccgaccgctccttcctggccaaggacatgccggagctggagggctac
acccactaccgcaacgtcgacgtctcctccatcaaggagctggcgcgacgctggtacccc
ggcgccttccgccacgcgcccgccaagcagggcaaccaccgcgccctggccgacatccag
gaatcgatcgaggagctcatgtactggcgcgaggcgctgatggtggcggcccccggtccg
agttcggagaaggccaccgagatcgccgggaagtaccagggactgctcaccggatctggg
cgcgagcaggcctga
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