Acidovorax carolinensis NA3: CBP34_07735
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Entry
CBP34_07735 CDS
T04997
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
acin
Acidovorax carolinensis NA3
Pathway
acin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBP34_07735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acin03019
]
CBP34_07735
Enzymes [BR:
acin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CBP34_07735
Messenger RNA biogenesis [BR:
acin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CBP34_07735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
CMS1
Motif
Other DBs
NCBI-ProteinID:
ART51581
UniProt:
A0A240U2G2
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All DBs
Position
1:complement(1643304..1644560)
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AA seq
418 aa
AA seq
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MPFSALGLSPALIHSATAMGFVAPTPIQEAAIPAILRGADVVGSAQTGSGKTAAFALPLL
QLLQAGAPHTPRRVRALVLVPTRELAAQVGEVVRTLAQHLPQPVKVAVVFGGVSINPQMM
GLRGGADVVVATPGRLLDLVEHNALQLASVNLLVLDEADRLLDLGFAEELQRTLALLPQQ
RQNLFFSATFPAAVQTLAEGLLTDPVRVAVADTPANEPSIAQRAIAVDASRRTQLLRHLV
QEHQWSRVLVFVATQYAAEHVAEKLYKAGIFATPFHGGLSQGARKQVLQEFKDDRWQVVV
TTDLAARGIDIAQLPAVVNYDLPRSAVDYVHRIGRTGRAGESGVAVSFVTADAEAHFRLI
EKRQHLSLPREQIPGFEPTEVPPEATAASTGGIKGKRPSKKDKLRAAAAAAQAAKGQD
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgccattttctgccctcggtctttctcccgcactcatccactccgccacggccatggga
tttgtcgcgcccacgcccatccaggaggcggccattccggccatcctgcgcggcgccgat
gtcgtgggctcggcccagacgggctcgggcaaaacggcggcattcgccttgcccctgctg
cagctgctgcaagccggtgcgccccacacgccgcggcgggtgcgtgcgctggttctggtg
cccacgcgcgaactggcggcccaggtcggcgaagtggtgcgcaccctggcccagcacctg
ccccagcccgtgaaagtggccgtggtgtttggcggcgtctccatcaacccccagatgatg
ggcctgcgcggtggggccgatgtggtggtcgccacgccgggccgcctgctcgatctggtg
gagcacaacgcactgcagcttgccagcgtgaacctgctggtgctggacgaggccgaccgc
ctgctcgacctgggctttgccgaggaactgcagcgcaccctggcgctgctgccacagcag
cggcagaacctgttcttttcggccacttttccggcggctgtacagacgctggccgagggc
ttgctgaccgaccccgtgcgcgtggccgtggccgacaccccggccaacgagccgtccatc
gcgcagcgcgccattgcggtggacgcgagccgccgcacgcagttgctgcgccacctggtg
caggagcaccaatggagccgcgtgctggtgttcgtggccacgcaatatgcggccgaacat
gtcgccgaaaagctctacaaggccggcatctttgccacacccttccatggtggcctgagc
cagggcgcgcgcaagcaggtgctgcaggagttcaaggacgaccgctggcaggtggtggtg
accacagacctggcagcgcgtggcatcgacatcgcccagctgcctgcggtggtgaactac
gacctgccccgctctgcggtggattacgtgcaccgcatcggccgcacgggccgcgcgggc
gaaagcggcgtggccgtgagctttgtcacagccgatgccgaagcgcatttccgtctgatc
gagaaacgccagcacttgagtttgccgcgcgaacagatccccggattcgagcccaccgaa
gtgccaccagaggccacggccgcaagcaccggcggcatcaaaggcaagcggcccagcaag
aaagacaagctgcgcgcggcagccgcggcagcgcaggcggcaaaagggcaggattaa
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