Arthrobacter citreus: HPK19_22745
Help
Entry
HPK19_22745 CDS
T06606
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acit
Arthrobacter citreus
Pathway
acit03030
DNA replication
acit03430
Mismatch repair
acit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPK19_22745 (dnaE)
03430 Mismatch repair
HPK19_22745 (dnaE)
03440 Homologous recombination
HPK19_22745 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acit03032
]
HPK19_22745 (dnaE)
03400 DNA repair and recombination proteins [BR:
acit03400
]
HPK19_22745 (dnaE)
Enzymes [BR:
acit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPK19_22745 (dnaE)
DNA replication proteins [BR:
acit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPK19_22745 (dnaE)
DNA repair and recombination proteins [BR:
acit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPK19_22745 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
FadR_C
Motif
Other DBs
NCBI-ProteinID:
QKE75349
LinkDB
All DBs
Position
4784547..4787891
Genome browser
AA seq
1114 aa
AA seq
DB search
MSFVHLQVQSSYSLLQSACKIDELINAAVKKGHPALAIADENVMYGVIPFYHACQKAGIK
PIVGVKLSILMDEQQSYPMVLLAKDLTGYQNLLKLTSIIGTKSPQGIPKKWLSAYSSGVI
AITPGLEGEIENLLLNGEIERATLHLKEYQTIFNHFYVSIQDHGLPENRALYPLIKQLQK
ETNIKLVITNDVRYIEKDDALIQDALFSVKNGTKLSDESRPRLYSSEYYYKTKTELLSLF
VDEEESFQNTLHIADLCDLTIPFHQPLLPKYPVPEEYSTVEYLKIVCEKGLIERYGEMND
ELKHRLDFELNTINKMGFNDYFLIVWDFIKYAHEQGIAVGPGRGSAAGSLVAYVLKITNV
DPIHYNLLFERFLNEERITMPDIDIDFPDHRRDEMIDYVASKYGDVHVAQIITFGTLGAK
AAIRDIARVMGLAPSEIDRYSKLIPSTLGITLKDVYEQSKAFNSHVEHSGIHKRIFEVAC
RVEGLPRHTSIHAAGVIISELPLTNVVPLQEGNHGVFLTQYPAEILEELGLVKMDFLGLR
NLSLLEEVCRLIYETKGDLIKLEEIPLEDQKTFEILSKGDTSGVFQLESSGMRRVLQQLQ
PNQFEDIVAVNALYRPGPMEQIPKFIQYKHGLEKVTYPHPVLEKILEPTYGVIVYQEQIM
QIASTLSGFTLSEADLLRRAVSKKKKEVLDEERIHFVEGAISKGYDEQVANEVYDLIVQF
ANYGFNRSHAVAYSMIAYQLAYLKANFPLQFYVALLSSFIGSEEKVSNYIGEAKLKGIPI
YPPSINKSQYAFVVEGNGIRFSLLAIKNIGMATVREILQKRPYKDFFDVCIKISPKALNR
KSIENLIFAGCFDEFNLDRATLLANIDIIFDYVDIVRPENEDQFDLFLDEDFVPKPEIIR
VDPMKISIKLELEKQALGTYLTGHPISQYEKLHIESGTSTISSILMKKDSEHLLFVYIKD
LRITKTKKQQHMAFLQVEDLSTSIDAVVFPTTFEKYRHKLKEKEVVVVKAKIDERDERKQ
LIINEVLSIEEMEERNEQKEYTLFIKITGHTNKNISYTIQQAIAKFKGHTKVVLYYDEEK
KAVQLSEQYYVNPSVACLSALKNIVGDANVVLKK
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgttcatttgcaagttcaaagttcttatagcttattacaaagcgcatgtaaa
atagatgaattaataaacgctgctgtaaaaaaaggacatcctgcgcttgctattgcagat
gaaaatgtcatgtacggtgtaattcctttttatcatgcgtgtcaaaaagcaggaattaaa
cctattgtaggggtaaagctttcgattttaatggatgaacagcagtcttatccgatggtt
ttactagctaaagatttgactggttatcaaaatcttttaaaactgacaagtattattgga
acaaaatcaccacaaggaattcctaaaaaatggttatcagcatatagtagcggagtaatc
gcaattaccccaggtttagaaggtgaaattgaaaacttacttttaaatggtgagattgaa
agagctaccttgcatctaaaagagtatcaaacaattttcaatcacttttacgtaagtatt
caagatcacggattacctgaaaatcgagctctgtatccattaataaagcaactccaaaaa
gagacaaatataaagctagtgattacaaatgatgttcgatatattgaaaaagatgatgca
cttattcaagatgcattattttccgttaaaaacggtacgaagttatcggatgaatcaagg
ccaagactatattcgagtgaatattattataaaactaaaactgaattgttaagtttgttt
gtggatgaagaggaatcctttcaaaacactttacatattgcagatttatgcgatttaaca
attccatttcatcaacctctattgcctaaatatccagtccctgaggaatattcaacagtt
gaatatttaaaaattgtttgtgaaaaagggctaattgaacgttacggggaaatgaatgat
gaacttaagcatagattagactttgaattaaacacgatcaataagatgggattcaatgat
tatttcctcattgtttgggattttataaaatatgcacatgaacaaggaattgcggttgga
ccaggacgtggttctgcagctggatcattagtagcatacgttttaaagattacaaatgtc
gatccaattcattataatttacttttcgaacgatttttaaatgaagaaagaattacgatg
cccgatattgatattgacttcccagatcatcgacgtgatgaaatgattgattatgtagca
tcaaaatatggtgatgttcatgttgcacaaattattacgtttggaactttaggtgcaaaa
gcagcaattagagatattgcaagggtaatgggactagcgccatcagaaatcgaccggtat
tctaaactaattccttcaacgctagggattacattaaaagatgtttacgaacaatcaaaa
gcatttaatagccacgtagaacattccggtattcataaacgaattttcgaagtagcatgt
cgtgttgaaggtttaccacgacatacaagtattcacgcagcaggtgtcattatttctgag
cttccgttaacaaatgttgtcccgctacaagagggaaatcacggggtgtttttaactcaa
tatcctgctgaaatacttgaagagctaggattagtaaagatggacttccttggacttcga
aacttaagtttattagaagaggtctgtcgattaatttacgaaacaaagggcgatttaatt
aaattggaagagattccattagaagatcaaaaaacatttgaaatcctaagtaaaggggat
acttcaggtgtttttcagctagaatcatcagggatgagaagagtattacagcaattacag
ccaaatcagtttgaagatatagttgctgttaacgcactttatcgtccaggtccgatggaa
caaattccaaagtttattcaatataagcatggattggagaaggtgacataccctcatcca
gttttagaaaaaatattagaaccaacttatggagtaatcgtttatcaagaacaaatcatg
caaattgcttctactctttcaggatttactttaagtgaagctgatttacttcgcagagca
gttagtaaaaagaagaaggaagttttagatgaagaaagaattcattttgtagaaggtgca
atttctaaaggttatgatgagcaagttgcaaatgaagtatacgatttaattgttcaattt
gctaattatggttttaacagaagtcacgctgtagcttatagtatgattgcttatcaatta
gcctatttaaaggcgaattttccacttcaattttatgttgcacttttatcaagctttata
ggaagtgaagaaaaagtatcgaattatattggtgaagcgaaattaaaagggattccaatt
tacccgccttccattaataaaagtcagtatgcatttgtcgttgaagggaatgggattcga
tttagtttgttggcaattaaaaatattggtatggctactgtaagagaaattctacagaaa
cgtccgtataaagatttttttgatgtatgtattaaaatatctccaaaagcattaaaccga
aagagtattgaaaatttgatttttgcaggatgcttcgatgagtttaatcttgatcgcgca
actttattagctaatatcgatattatttttgattatgtggatatcgtaagacctgaaaat
gaagatcaatttgacttatttctagatgaagattttgttccaaaacctgaaattattaga
gtcgatccaatgaaaatttcaatcaagcttgaattggaaaaacaagcattaggtacgtat
ttaacaggtcatccaattagccaatatgagaaattgcatattgaaagtgggacttccacc
atttcatcaattttgatgaaaaaggattcggagcatttattgtttgtctatattaaggat
ttacgcattacaaaaacaaaaaaacaacagcatatggcttttttacaagtagaagattta
agtacttcaatcgatgcagtcgtgtttccaactacctttgaaaagtaccgccacaaatta
aaagaaaaagaagtagtagtcgtaaaagcaaaaatcgatgaacgggatgaaagaaagcaa
ttaatcataaatgaagtactttcgattgaagagatggaagaaagaaatgagcagaaagag
tatactttatttattaaaataacgggacatactaataaaaatatttcttacacaatacaa
caagcaatcgctaaatttaaaggacatacgaaggtagttctttattacgatgaagaaaaa
aaggcagttcaattatctgagcaatattatgtaaatccttcagtagcttgtctttcagcg
ctaaaaaatattgtaggagatgctaatgttgtactaaagaaatag
DBGET
integrated database retrieval system
