Aminobacterium colombiense: Amico_1339
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Entry
Amico_1339 CDS
T01202
Name
(GenBank) peptidase M15D vanX D-ala-D-ala dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
aco
Aminobacterium colombiense
Pathway
aco01502
Vancomycin resistance
aco02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
aco00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Amico_1339
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Amico_1339
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aco01002
]
Amico_1339
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aco01011
]
Amico_1339
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
aco01504
]
Amico_1339
Enzymes [BR:
aco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
Amico_1339
Peptidases and inhibitors [BR:
aco01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
Amico_1339
Peptidoglycan biosynthesis and degradation proteins [BR:
aco01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
Amico_1339
Antimicrobial resistance genes [BR:
aco01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
Amico_1339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
VanY
RdfA
Motif
Other DBs
NCBI-ProteinID:
ADE57456
UniProt:
D5EFX4
LinkDB
All DBs
Position
complement(1368714..1369448)
Genome browser
AA seq
244 aa
AA seq
DB search
MYDKPISRFDFSFSKAYTLPIVESGEPVVPVGLCPDRVVVLQQYYLEGIKGALPEAYLRE
EVFRRLVSAARNLPKGYRFVLFDGWRPVKLQKGLFSAYVERLRSEYPDASEKTLQEMASK
YVALPSKDPARPSPHLTGGAVDCTIADEDGVMLDMGADFDETSNRSKSRWLEDRLEAGET
LSERELFVLRNRRMLHAVMEKAGFTNYPEEWWHFDYGNQNWALITGAKNAIYGPASPRFA
WRTP
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacaaacctatttcacggttcgatttttcctttagcaaggcatatactttaccc
atagtggaaagcggagagccagttgttcctgtaggtctctgtcctgaccgtgttgttgtg
ttgcaacaatattatctcgagggcatcaaaggggcactccccgaggcctaccttcgagaa
gaagtttttcgaaggctagtatcggcagctaggaatctaccaaagggttatcgatttgtg
cttttcgatggatggaggcctgttaagctccagaaagggctattttccgcctatgtggaa
agacttcgctctgagtatccagatgcctcagagaaaaccctgcaggaaatggcttcaaaa
tatgtggcacttccgtcaaaggatccagcacgcccttccccccaccttacaggtggagca
gtggattgtactatcgctgatgaagatggcgtgatgcttgatatgggagctgactttgac
gaaacatctaatcgctcaaaatcccgctggttggaagatcgcctcgaagctggtgaaact
ctttcagaaagagaactgtttgtattgcgcaatcgtcgaatgctacatgccgttatggaa
aaggctggctttacaaactatccggaggagtggtggcacttcgactatggcaatcagaat
tgggcgttgattactggagcaaaaaacgcaatctacgggccagcttctccgagattcgcg
tggagaaccccataa
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integrated database retrieval system
