KEGG   Anaeromyxobacter dehalogenans 2CP-1: A2cp1_1020Help
Entry
A2cp1_1020        CDS       T00833                                 

Definition
(GenBank) DNA polymerase LigD, polymerase domain protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
acp  Anaeromyxobacter dehalogenans 2CP-1
Pathway
acp03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:acp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    A2cp1_1020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acp03400]
    A2cp1_1020
Enzymes [BR:acp01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     A2cp1_1020
DNA repair and recombination proteins [BR:acp03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     A2cp1_1020
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: ACL64371
UniProt: B8JF14
LinkDB All DBs
Position
complement(1143855..1144796)
Genome map
AA seq 313 aa AA seqDB search
MARAQQGVEVEVEGRRIQLRNLDKVFYPEAGFTKGEVVDYYRRVAPVLLPHLRDRPLTLK
RYPEGVDGPHFYEKRCPRHRPDWFRTEAIWSEGNQDYIDYCVVDDLSSLVWLASIADLEL
HPSLSRVDDVERPTALVFDLDPGPPAELLACCEVALLLRRLLAALGLEAFPKSSGSKGMQ
LYVPLSGATYADTKPFAHAVARVLERRHPQLVVERMAKALRGGKVLVDWSQNDPHKTTVC
VYSLRARPRPTVSTPLRWAEVEKAVRTRDAGGLVFEAGAVLRRVERVGDLFAPVLTLRQR
LPAPAELERAAGA
NT seq 942 nt NT seq  +upstreamnt  +downstreamnt
gtggcgcgcgcgcagcagggcgtggaggtcgaggtggaggggcggcggatccagctgcgc
aacctcgacaaggtcttctaccccgaggccggcttcaccaagggtgaggtggtggactac
taccgccgcgtcgcccccgtgctcctgccgcacctgcgggatcggccgctcacgctgaag
cgctacccggagggcgtggacgggccgcacttctacgagaagcgctgtccgcgccaccgc
ccggactggttccggaccgaggcgatctggagcgagggcaaccaggactacatcgactac
tgcgtggtggacgacctgtcctcgctggtgtggctcgccagcatcgccgacctggagctc
cacccctcgctgtcgcgggtggacgacgtggagcggcccaccgcgctcgtgttcgacctc
gacccgggcccgcccgccgagctgctcgcctgctgcgaggtggcgctgctgctgcggcgg
ctgctcgccgcgctgggcctggaggcgttcccgaagagctccggctcgaagggcatgcag
ctgtacgtgccgctctccggcgccacctacgcggacacgaagccgttcgcgcacgccgtc
gcccgcgtgctggagcgccgccacccgcagctcgtggtcgagcgcatggcgaaggcgctc
cgcggcggcaaggtgctggtggactggagccagaacgacccgcacaagaccaccgtctgc
gtctactcgctccgggcgcggccgcgccccaccgtctccaccccgctccgctgggcagag
gtggagaaggccgtgcggacccgcgacgcgggcgggctggtgttcgaggcaggcgcggtg
ctccggcgggtcgagcgcgtgggggacctgttcgccccggtgctgacgctgcgccagcgc
ctgcccgccccggcggagctcgagcgggcggccggcgcgtga

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