Anaeromyxobacter dehalogenans 2CP-1: A2cp1_3339
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Entry
A2cp1_3339 CDS
T00833
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
acp
Anaeromyxobacter dehalogenans 2CP-1
Brite
KEGG Orthology (KO) [BR:
acp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acp03021
]
A2cp1_3339
Transcription machinery [BR:
acp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A2cp1_3339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
HTH_23
HTH_Crp_2
Sigma70_r4_2
Sigma70_r4
HTH_24
Xre-like-HTH
HTH_AsnC-type
HTH_8
HTH_29
Sigma70_ECF
Crp
HTH_28
KORA
HTH_30
HTH_11
MarR_2
HTH_20
HTH_3
MarR
HTH_Tnp_ISL3
HTH_50
GerE
HTH_36
HTH_10
HTH_17
HTH_18
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
ACL66673
UniProt:
B8JHG1
LinkDB
All DBs
Position
3717201..3717686
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AA seq
161 aa
AA seq
DB search
MDEQAAARLYRTYGPAVYRRCLRLLRDRELARDATQDVFVQLLRHWTTSTEPEAVLHWIY
RVATNHCLNLLRNARRHGERSLELAPARAAAGTAAEPQRLVAQRVLSRFDEVTQAVAVGV
FVDGMEHEELARALGISRRTVSRRLDRFVESAREYLARGEG
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcaggcggctgcccggctctaccggacctacgggccggccgtctatcgccgt
tgcctgcggctgctgcgggatcgcgagctggcccgcgacgcgacgcaggacgtcttcgtc
cagctcctgcggcactggaccacgtcgaccgagccggaggcggtgctgcactggatctac
cgggtggccaccaaccactgcctcaacctcctgcgcaacgcgcggcgtcacggggagcga
tccctggagctcgccccggcgcgcgcggcggcggggacggccgccgagccgcagcgcctg
gtcgcgcagcgggtactgtcgcggttcgacgaggtgacgcaggcggtcgcggtgggggtg
ttcgtggacgggatggagcacgaggagctggcgcgtgcgctcgggatctcccggcgtacg
gtgagccgtcgcctcgaccgcttcgtcgagtccgcgcgcgagtatctggcccgaggtgag
ggatga
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