Acidovorax sp. RAC01: BSY15_2034
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Entry
BSY15_2034 CDS
T04481
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
acra
Acidovorax sp. RAC01
Pathway
acra00521
Streptomycin biosynthesis
acra00523
Polyketide sugar unit biosynthesis
acra00525
Acarbose and validamycin biosynthesis
acra00541
O-Antigen nucleotide sugar biosynthesis
acra01055
Biosynthesis of vancomycin group antibiotics
acra01100
Metabolic pathways
acra01110
Biosynthesis of secondary metabolites
acra01250
Biosynthesis of nucleotide sugars
Module
acra_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
acra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
BSY15_2034 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BSY15_2034 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
BSY15_2034 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BSY15_2034 (rfbB)
00525 Acarbose and validamycin biosynthesis
BSY15_2034 (rfbB)
Enzymes [BR:
acra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
BSY15_2034 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
AOG23242
UniProt:
A0A1B3PKD4
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All DBs
Position
2258553..2259653
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AA seq
366 aa
AA seq
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MILVTGGAGFIGANFVLDWLGASAEPVVNLDKLTYAGNVHNLDSIQGDARHIFVQGDIGD
AALVARLLAEHRPRAVVNFAAESHVDRSIHGPEDFIQTNIVGSFRLLEAVRAYWSALPEG
DRAAFRFLHVSTDEVYGSLAPTDPAFTETRGFEPNSPYSASKAASDHLVRAWHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLMIVNALAGKNLPVYGDGMQVRDWLYVKDHCSAIRRVLEA
GVPGETYNVGGWNEKPNIDIVNMVCGLLDELRPRADGQSYRTQVTYVKDRPGHDRRYAID
ARKIERELGWKPAETFDTGIRKTVQWYLDNAQWVANVQTGAYRDWVQTQYAQESAVPAAA
VAGTRA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgattctggttactggcggcgcgggtttcattggcgccaacttcgttcttgactggcta
ggggcctcggccgagccggtggtcaaccttgacaagctcacttatgcgggcaacgtgcac
aacctggacagcatccagggggatgcgcggcatatttttgtgcagggcgacatcggagat
gcagcgctggttgcgcggctgctggccgagcacaggccccgtgccgtggtcaactttgcg
gccgaatcgcatgtggaccgctccatccacggccccgaggacttcatccagaccaacatc
gtcggctcgttccggctgcttgaagccgtgcgggcctactggagcgcgctgcccgaaggc
gaccgcgctgcctttcgcttcctgcacgtatccaccgacgaggtgtacggctcgctcgcc
ccgacggacccggccttcaccgaaacgcgcggcttcgaacccaacagcccctacagcgcc
agcaaggccgccagtgaccacctggtgcgcgcctggcaccacacctacggcctgccagtg
ctcaccaccaactgcagcaacaactacgggccctaccacttccctgaaaagctcattccg
ctcatgatcgtcaacgccctggccggcaagaacctgccggtgtatggcgacggcatgcag
gtgcgcgactggctctacgtgaaagaccactgcagcgccatccgccgcgtgctggaggca
ggcgtgcccggtgagacctacaacgtgggtggctggaacgagaagcccaacatcgacatc
gtgaacatggtctgcggcctgcttgacgaactgcgcccccgcgccgacggccagagctac
cgcacccaggtcacctacgtgaaagaccgtcccggccacgaccgccgctatgccatcgac
gcccgcaagattgagcgcgagctgggctggaagcccgccgagaccttcgacaccggcatc
cgcaagaccgttcagtggtacctggacaacgcacagtgggtcgccaacgtgcagaccggc
gcttaccgcgactgggtgcaaacccagtatgcgcaggagtccgcagtaccagccgccgct
gtggcaggcacgcgcgcatga
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