Aspergillus clavatus: ACLA_050170
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Entry
ACLA_050170 CDS
T01148
Name
(RefSeq) nucleoporin SONB, putative
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
act
Aspergillus clavatus
Pathway
act03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
ACLA_050170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
act03019
]
ACLA_050170
03036 Chromosome and associated proteins [BR:
act03036
]
ACLA_050170
Messenger RNA biogenesis [BR:
act03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
ACLA_050170
Chromosome and associated proteins [BR:
act03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
ACLA_050170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nucleoporin_FG
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
4703892
NCBI-ProteinID:
XP_001271971
UniProt:
A1CI40
LinkDB
All DBs
AA seq
2007 aa
AA seq
DB search
MSFGGGFGGFGQNTQQSSGFGTGSGFGGTTSGGGFGSTSSPFGGGNTPGGGLVGNTSSFG
SGGGFGTNTQTQSNSLFGSQNRTSGFGTGTTSGGSLFGGGTSTTGGTGFGGFGTTGTTGT
TGTTGGFGSPAAAGGGLFGNKPAGGFGTTTGTTGGFGAGSGGFGTTGTTGFGGGTGTAFQ
QAVPLCEGTGGTPFSPFSEKDSSSNVTNYYQSISFMQPYSKYSFEELRLADYNQGRRYGN
ASGQAGAFGTSAFGGSGFGTQQATTGFGTTSSPFGGGTSAPSAFGTTQTAGGGFGNTTNP
LFGASKPATSLFGGGTSTTSQPSLFGGTTATTGGFGTTPTGTTGFGTGGSLFGGNAQQPQ
QPQQNKPLFGGGTTTTTGTGTGFGGFGAQNTSAASPFGGTAATSSPFGGQQQQQQPATGT
SAFGGFGQQNQAQNQTQNKGLFGGFGANTQQQQTATPGLFGGGGTGATTGTSLFGQNAQQ
TQQPAAGGSLFGGNAPQTGTSSLFGGAQQQGQKSLFGAGTTGAATGTGAGTGAFGGFGGA
QNQQAGTSSLFGAGQAQQQQKPSLFGGGTTGAGSSLFGGPATAAQPAGSSLFGNTQNQQQ
QGGLGTSSLFGSTQQAQPMQPQQAQQPVPGSLQASLLDGNPYGNQSIFSGLPAPSAASPG
PLATPLSSSIKQKQRTPLPAYKITPNAANRLVTPPKRQGYGFSYSTYGSPSSSTSTSSGL
GGSLLGGSLRGSVSGSLGRGSFSKSFSTSNLRKTFDPETDSVLSPGALSGTSRLSSGGLK
RLTIDRSLRNDLFARPASTPAAAITNGEDFAQTTEKMKKRVSFDSSSKALDATLTTGGEV
VPITSESPEPTAEELGFLRSTRKSGSVNGINGVKTTPEHGARAEMESVRGKDLPAVPEDA
EQSAITDGAARLPFVPGGDPKPGEYWIKPSRAELNKMSREDLKHVVGFTVGRQHCGQVTF
DEPVDLTTIDLDQIFGGLVEIGVRKITVYPDEAIKPPMGKGLNVPSILRIENSWPRGRDK
KSPSPLTSGPLFDKHVDRLKKVTNTEFIDYEKQTGTWIFKVPHFTTYGLDYDSDDEGESL
NQSTFSAAPDTPTPKAQTPANFVNTVGSEPTSTFTTDDSFVGSVAGVDDDTFDFKKRKLV
PGAFGNQPMETNGNQDYASEEEESFLGDGSTGSTTEQHGDDVTESQLSGESDVEFDEGEE
MDMAGTFPNLDHTVEHDDANSTDSYIDNTQPSLRPWETPSKVRLDRSGDWAEQLQRTISP
RKQNRDALREIQANAFIDRSLHDNTPKMAVADSRQKGFATSIDLMNSLFQQPRKQPGQSP
SKVQPVQPKGLEWPYNQQPKTFAGESNELSEDDLAFHHSFKPRWGPMDSLICARNDMRGN
PPQTGTRWEEKLSITSEGRDVDVLVFKKDNEPRGMLDAQQKQTLVEVTDGVPFAHLKQAD
FGSFTQTSLSSMQSDKERLIWQLTSILFNDGIEDDISAGVPSQLRSKYLHRIKKDRLSRM
WAGVVRERHAHDLDKAGSPEEHAIHLLCSHRVEEACKVLIASQNLHLATLVSQIGRDPTS
RFDMAKQIETWREHNVWSEMTEPIRALYELLAGNALRSEGKSGGALEDRASTFTFTERFE
LDWFQAFGLRLWYGISDDEPIETAVFKFARELSSGEEAAFPYPTSHLDGAGMSQATPVTF
GLESPLWVLLKVYSGTAVGFKKSDLPAMEFPAALLPESVTGDKLSNRITFQLYQLLQTAI
GEHETFKVDQARADQLVWDYACELGSTGDLRHALFVLLHLSRPSDRERAAKETLARFAAF
LPDPLNAQGTPDTTWQYLTAELQLPEAWIWVAKALYARDSGDAAREVDCLIRGKKWNDAH
STFCRIVGPTSVIERDYSTLEALISGFGEGPERKVQGWASRGGIYEDFLRLVTAKNGKRD
PARLSRLIKALATMSETIDKGSGVEGLEERVAFKEMSRAVAGWTAHEDVSEIELPSVLNL
PLTGDARIMQTAEMSRRYYSTIMAGGY
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcggtggtggattcggtggcttcggccagaatactcagcagagctcaggcttt
ggaactggctctggatttggaggcacgacttctggaggaggctttggatccacctcatct
ccatttgggggcggtaacacaccaggtggcggcctggttggaaacaccagtagctttggg
tccggtggaggattcggcacgaacacacaaactcaatcaaattcgctctttggcagccaa
aatcgcactagcggctttggcactggcacaacatctggtggtagtctctttggcggcggt
acatctactactggtggcactggctttggtggttttggtacgaccgggactactggtacc
actggcaccactggaggtttcggaagccctgccgctgctggcggaggactattcggtaac
aagcctgctggtggatttggcactacaaccggtaccactggtggatttggggcaggcagc
ggcggtttcggcacaaccggtaccacaggctttggtggtggaacaggaaccgcgtttcaa
caagctgttccgctttgtgaaggcaccggaggcaccccgttcagtcccttttctgaaaag
gacagcagctccaatgtgaccaattactaccagagcatctcgtttatgcaaccgtacagc
aagtattccttcgaggaactgcgtctggccgactataaccagggccggagatatggaaac
gctagtggacaggctggagccttcggcacctctgctttcggaggttctggctttggcacg
cagcaggcgaccactggattcggtacgacttcatcgccattcggtggcggcaccagtgcc
ccctcggcctttggtaccacccagacggcaggaggaggattcggcaacaccaccaaccct
ctgtttggtgcgtccaagccagcaacctccctcttcggaggtggaacctcgacaacttct
caacccagcttgttcggcggcaccaccgccacgactggtgggtttggcaccacaccaact
ggcacaaccggttttggaactggtggctcgttgttcggcggcaacgctcagcaaccgcag
caaccgcagcagaacaagcccttgttcggagggggcactaccaccaccactggtactgga
actgggttcggcggctttggcgcccaaaatactagtgctgccagcccctttggtggtact
gccgcaacctcatctccattcggcggtcagcagcagcagcaacagccggcgacgggaacg
agcgcctttggtggattcggacagcagaatcaggcacaaaaccagacacaaaataaagga
ttgtttggtggattcggcgccaacacccagcagcagcaaactgccacccccggtctcttt
ggcggcggtggtactggtgccaccacgggcacctctctcttcggtcaaaacgcccagcaa
acgcagcaaccggccgcaggtggctcattgtttggaggaaatgctccacaaactggaacg
agctcactctttggtggagcccaacagcaaggccagaagagcttgtttggcgctggcaca
actggtgccgccacaggcacaggcgcaggaaccggtgcttttggaggtttcggaggggcc
cagaaccagcaggcggggacaagtagcctgtttggcgctggtcaagcgcagcagcagcag
aagcccagcctcttcggtggtggcaccactggcgcaggtagttccctcttcggaggccca
gctacagccgcccaacccgccggctcctcgctctttggcaacactcaaaaccagcagcaa
cagggaggtcttggcacgagcagcctcttcggtagcacccagcaggcacagccaatgcaa
ccgcagcaggcacagcagccagtacccggcagcttgcaagcctctttgctggatggcaat
ccatatggtaaccagtctattttctctggtttgccagctcctagtgccgctagccctgga
cccctggcgacgcctctctcttcgtccatcaagcagaagcagcggaccccgcttcctgct
tataagatcacacccaacgctgctaaccgcctggttacgccccccaagcgccagggctac
gggttctcctactcgacttacgggtctccctccagttcgacgagcacttcctctggcctc
ggcggcagtctcctaggtggcagtctacgtggaagtgtcagcggtagtcttggaaggggt
agcttcagcaagagcttctctaccagcaatcttcgcaagaccttcgacccggaaaccgac
agtgtcttgtctcctggcgcactttccggtacttcccgcttgtccagcggtggcctgaag
cgcctgacaatcgatcgtagtttgcgcaatgatttgttcgcgcgtcctgcaagcacaccc
gcagctgcaattaccaacggtgaagatttcgctcagacgaccgagaaaatgaagaagaga
gtgagttttgactcttcctccaaggctctcgatgccactcttactacgggtggagaagtc
gttccaatcacgtctgagagtccggagcccactgctgaggagcttggattcttgcgctcg
acccgcaagagtggaagtgtgaatggaatcaatggggtcaaaacaactcctgagcatggc
gctcgtgctgagatggaatctgtgcggggtaaggatctccctgctgttccagaggatgcc
gaacaatctgcaattaccgacggggctgcccgacttccctttgtccctggaggagatccc
aaacccggcgaatactggataaagccatcgcgggctgaacttaataagatgagccgcgag
gatctcaagcatgttgttggcttcactgttggacgccaacactgtggccaggtgaccttc
gatgaacctgtcgacctgacaactatcgacctcgaccaaatcttcggtggccttgtggag
atcggtgtgcgcaagatcaccgtctatcccgacgaggcaatcaagcctccaatgggtaag
gggctgaacgtcccatctattctacgcatcgaaaactcgtggcctagaggcagagacaag
aagtcgccttcgcccctcacgagcggacctctcttcgacaaacacgtcgatcgtctgaag
aaggtaaccaacaccgaattcatcgactacgagaaacagacgggaacatggatcttcaaa
gtgccccacttcaccacctatggccttgattatgatagtgatgatgaaggtgagagcctc
aaccaaagcactttcagtgctgctcctgacactccgactccgaaggcccagacccccgcc
aactttgtgaataccgtgggctcagagccaacgtccacattcacaactgatgactccttc
gtcggttctgtggctggagtcgacgacgacacttttgatttcaagaagcgtaaattggtt
ccaggggcgtttggcaatcagccaatggagacaaacggaaatcaggattatgcttccgaa
gaagaggagtcttttttaggggacggctccacgggttcaactactgagcagcatggtgac
gatgtcaccgaaagccagctatctggcgaatcagacgttgaattcgatgaaggcgaggaa
atggacatggcgggcacctttcccaaccttgatcataccgtggagcacgacgatgccaac
agcaccgacagctacattgacaacacccagccttcattgaggccatgggagactccctcc
aaggtccgactggaccggagcggcgattgggccgaacaattgcagcgaacgatcagtccg
agaaagcaaaaccgagatgcgcttcgcgagatccaggcaaatgctttcatcgatcgatcg
cttcatgacaacacgccgaagatggccgtggccgacagtcgacagaaagggtttgcaaca
agcattgatttgatgaattcgttgtttcagcaaccgcgcaagcagccaggacaatctcct
tccaaggtgcaacctgtgcagccgaagggtcttgagtggccttataatcagcagcccaaa
acctttgctggcgaatcgaatgaactaagtgaagacgacctggcctttcaccactcattc
aagccacgatggggtccaatggactctttgatctgcgccagaaatgacatgagaggaaac
ccaccccagacgggcactcgatgggaagaaaagctctctatcaccagtgaaggaagggat
gtcgatgtgctggttttcaaaaaagacaacgagcctagaggaatgcttgatgctcagcaa
aagcagactctcgttgaggtgaccgacggagtcccgttcgcgcatttgaaacaggctgac
tttgggtcattcacacaaacgtcactgagttctatgcagtcagacaaagagagactcatt
tggcagctgactagtattcttttcaacgatgggattgaagatgatatttctgccggagtg
ccatcgcaacttcgctctaaatatcttcaccgcattaaaaaggaccgattgagtcgcatg
tgggcaggggtcgtgcgtgagagacatgcccatgatctggacaaagccggttctcccgaa
gagcatgctatccacttgctatgctcgcaccgagttgaagaggcttgcaaggttctaatc
gccagccaaaacctccacctggcaacactggtctcgcaaatcggcagagatcccacttcc
cgtttcgacatggccaagcagattgagacgtggcgcgagcacaacgtctggtcggaaatg
acggagccaattcgagccttgtatgagctgttggcgggaaatgcgcttcgcagtgaggga
aagtctggtggcgcgctggaggatcgtgcctcgaccttcaccttcaccgagcggtttgag
ctagattggtttcaggcctttggcctccgtctgtggtatggcatttctgacgacgagcct
atcgagacggcggttttcaaatttgcccgggagcttagtagcggagaagaagccgctttc
ccctaccctacctctcatttggatggagctggtatgtcacaagctacaccggtcactttt
gggctggagtctcctctatgggttcttctcaaggtctactcgggcactgctgtcggtttc
aagaaatctgacttgccggccatggaattccctgctgccctgctacccgaatccgtaact
ggcgataagctctccaataggattaccttccagttgtaccaactgcttcagactgctatt
ggggaacatgagaccttcaaggtcgatcaggctcgggctgatcagttggtctgggactac
gcctgcgaactcggctccaccggggatttgaggcatgcgctattcgttctgctccatctt
tctcgcccatctgatcgtgaacgcgctgccaaggagacgttggcacgctttgcggcgttc
ttgccggacccgcttaacgctcagggtacgccagataccacatggcagtatctcacagct
gagctgcagctgcccgaggcctggatctgggttgcaaaggccctgtacgcccgcgatagc
ggggatgccgcgagggaggtggactgtttgattcgtggcaagaagtggaacgatgcgcac
tcgaccttctgtcgcatcgtgggtcctacctcggtgattgaacgggactattctactttg
gaggctttgatctcgggcttcggcgagggcccagagcgaaaagtccagggctgggcaagc
aggggtggcatctacgaggatttcctgcgtcttgtcactgccaagaatgggaagcgggat
ccagctcgcctgagtcgcttgatcaaggcgcttgccacgatgagtgagacgattgataag
ggatccggagtggaagggttagaggaacgcgtggctttcaaggagatgagccgcgctgtt
gctgggtggactgcgcacgaggatgtcagcgagatcgaattgccctctgtgctcaacctg
cctcttactggcgacgcgcgcatcatgcaaacggcagagatgagccggagatactacagt
actatcatggccggtggttattaa
DBGET
integrated database retrieval system