Actinomyces sp. Chiba101: CHIBA101_1108
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Entry
CHIBA101_1108 CDS
T05279
Name
(GenBank) DNA topoisomerase
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
actc
Actinomyces sp. Chiba101
Brite
KEGG Orthology (KO) [BR:
actc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actc03032
]
CHIBA101_1108
03400 DNA repair and recombination proteins [BR:
actc03400
]
CHIBA101_1108
Enzymes [BR:
actc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CHIBA101_1108
DNA replication proteins [BR:
actc03032
]
Prokaryotic type
DNA Topoisomerases
CHIBA101_1108
DNA repair and recombination proteins [BR:
actc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CHIBA101_1108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BAW92973
UniProt:
A0A1Q2TMI2
LinkDB
All DBs
Position
complement(1271397..1273904)
Genome browser
AA seq
835 aa
AA seq
DB search
MPKSATQTPPPTDGAIVEQDLSSEMRSSFLEYAYSVIYSRALPDARDGLKPVQRRILFQM
DRMGLRPDRPHVKSSRVVGDVMGKLHPHGDVAIYEALVRLAQPFTMRLPLIDGHGNFGSL
DDGPAAPRYTEARLAAPALALTADIDEDTVDFAPNYDYTLTEPGVLPAAFPNLLVNGASG
IAVGMATNMPPHNLGEVVSAARHLIEHPEATLDDLMAFVPGPDLPAGGMIVGLDGIREAY
RTGRGKFLTRATARVENVTARKKGIVVTELPYLVGPEKIIAAIKDKVASKRLQGITDVAD
LTDRKNGTRLVIGVKNGYNPEAVLTQLYRHTPLEDSFGINNVCLVDGQPRTLGLRELLEV
FVGHRLKVVERRTRFRLGKRRERAHLVDGLLIAILDIDEVIALIRSSEDAATARERLQQV
FDLSEAQASYILELQLRRLTKFSVIELEKERDELAREIEALEAILADDVLLRRVVSRELA
SVSEEFATPRRTVLLEAAGAAGPRPAAGAGRPDGAAGPAPLGLMAGAEEVPLTIPDDPCR
ILLSATGLVARTAGAEPVARSGARQPHDALVSQVATTARGRVGAVTDTGRLVRLDVVSAP
EIPRLEGAPSLAGGTPVRLLVEIEPEERVVGLVPVGDAGAAPIVLATAAGVIKRVKVGDE
PARGDAWEVISLADGDSVVFAGTAADTDVLTLVASDAQLLRFEASKVRPQGRAAGGMAGI
SLHDGAHVVAASAVSADLLAEAVVVTLAAGAGALPGTGGSVKVTPLDRYPAKGRATGGVR
AQRFLRGEDELVLAWVGVGPARAVGSGGQSITLPGPDERRDASGIPTVAPIIAIG
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagtccgccacccagacgccccctccgaccgacggcgcgatcgtcgagcaggat
ctctccagcgagatgcgctcgagcttcctggagtacgcctactccgtcatctactcccgg
gccctgcccgacgcccgtgacggcctcaagccggtgcagcgccgcatcctgttccagatg
gaccgcatgggcctgcggccggaccgcccgcatgtgaagtcctcgcgcgtcgtcggcgac
gtcatgggcaagctgcacccccacggcgatgtggcgatctacgaggcgctcgtgcgcctg
gcccagcccttcaccatgcgcctgccgctcatcgacgggcacggcaacttcggctccctc
gatgacggccccgcagccccccgctacaccgaggcccgcctggccgcccccgccctggcg
ctgacggcggacatcgacgaggacaccgtcgacttcgccccgaattacgactacacgctc
accgagccgggggtgctgcccgcggccttcccgaacctgctggtcaacggggcctcgggg
atcgccgtgggcatggcgacgaatatgccgccgcataacctgggcgaggtcgtcagcgcg
gcccgccatctcatcgagcacccggaggccacgctggatgacctcatggccttcgtgccg
ggcccggacctgcccgcgggcggcatgatcgtgggcctggacggcatccgggaggcctac
cgcacgggccgcggcaagttcctgacccgtgccacggcccgcgtcgagaatgtgacggcc
cgcaagaagggcatcgtcgtcaccgagcttccctacctggtgggccccgagaagatcatc
gccgccatcaaggacaaggtcgcctccaagaggctccagggcatcaccgacgtcgccgac
ctgaccgaccgcaagaacggcacccgcctggtcatcggggtgaagaacgggtacaacccc
gaggcggtcctgacccagctctaccggcacacgcccctggaggactccttcggcatcaac
aacgtgtgcctcgtggacggccagccccgcaccctgggcctgcgcgagctcctcgaggtc
ttcgtgggccaccggctgaaggtggtggagcggcgcacccgcttccgcttgggcaagcgg
cgcgagcgcgcgcacctggtggacggcctgctcatcgcgatcctcgatatcgacgaggtc
atcgcgctcatccgctcctcggaggacgcggcgacggcccgggagcgcctgcagcaggtc
ttcgacctgtccgaggcgcaggcctcctacatcctggagctgcagctgcggcgcctgacc
aagttctccgtgatcgagctggagaaggagcgcgacgagctcgcccgggagatcgaggcc
ctggaggcgatcctcgccgacgacgtcctcctgcgccgggtggtctcccgcgagctggcc
tcggtctccgaggagttcgccacgccgcgccgcaccgtgctgctcgaggcggccggcgca
gcgggcccgcggcccgctgccggcgcggggcgcccggatggggcggcggggccggctccg
ctgggactcatggcgggcgccgaggaggtgcccctgacgatcccggacgacccgtgccgg
atcctgctgtccgccacgggcctcgtggcgcgcacagcaggggccgagccggtggcccgc
tcgggcgcgagacagccccatgacgcactggtctcccaggtggcgacgacggcgcgcggc
cgtgtgggcgcggtgaccgacaccggtcgcctcgtgcgcctcgacgtggtctccgccccc
gagatcccgcgcctggagggagctccgtccctggcggggggcaccccggtgcgcctcctg
gtggagatcgagccggaggagcgcgtggtggggctcgtgccggtgggcgacgcgggcgcg
gccccgatcgtcctggccacggcggccggcgtcatcaagcgcgtcaaggttggcgatgag
cccgccaggggggacgcctgggaggtcatctccctggcggacggcgactccgtggtcttc
gccgggaccgccgccgacaccgatgtgctcaccctcgtggcctcggacgcccaactgctg
cgcttcgaggcctccaaggtgcgcccgcagggccgcgctgccgggggcatggcggggatc
agcctgcacgacggcgcccacgtggtcgccgcctcggcggtgagcgccgacctgctggcc
gaggcggtggtggtgaccctggccgccggcgcgggcgccctgcccggaacgggcggcagt
gtcaaggtgacgcccttggatcgctacccggccaagggccgggccaccgggggcgtacgc
gctcagaggttcctgcgcggcgaggatgagctggtcctggcctgggtgggcgtgggcccg
gcgcgcgccgtcggctcggggggccagagcatcaccctgccgggtcccgacgagcgccgc
gacgcctccggcatccccaccgtcgcccccatcatcgccatcggctga
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