KEGG   Actinoplanes sp. N902-109: L083_1682Help
Entry
L083_1682         CDS       T02655                                 

Definition
(GenBank) DNA polymerase LigD, ligase domain protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
actn  Actinoplanes sp. N902-109
Pathway
actn03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:actn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    L083_1682
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:actn03400]
    L083_1682
Enzymes [BR:actn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     L083_1682
DNA repair and recombination proteins [BR:actn03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     L083_1682
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-ProteinID: AGL15192
UniProt: R4L6P9
LinkDB All DBs
Position
complement(1833303..1834484)
Genome map
AA seq 393 aa AA seqDB search
MTTMPELIAPMLAAPGPLPGGAGWAFEFKYDGVRAISYVQPGSVRVLSRNNNDVSTHYPE
LGALSGLLGGRSAILDGEVVALEPGDRPSFARLAGRMHVARPTETLLATVPVVYYVFDLL
WFEGHDLLDQPYGTRRRLLADLGLTGGTIRLPPHFTDVAGGTVLRAAELGGLEGVVAKRL
DSVYRPGRRSDTWTKVPLIRTQEVVVLGWKAGAGRRAGTIGSLLLGVLDDDGALRFAGHV
GTGFTDVMLRRLQEQLTPLERRTPPAPDVPREQARHAHWVEPALVGEVAYRTWTPEGRLR
HASWRGLRTDRHPAEARRWPAPPPPALPEVEKALVTPDGRWRVEIVRGATHYRLAHGDNI
IDGLDLAGVQRLLTRAGVDFADLIEPGSNHSAA
NT seq 1182 nt NT seq  +upstreamnt  +downstreamnt
gtgaccaccatgcccgagctgatcgccccgatgctggccgcgcccggtccgctgccgggc
ggtgccgggtgggccttcgagttcaagtacgacggggtgcgggcgatcagctacgtccag
cccggttccgtacgggtcctgtcgcgcaacaacaatgatgtgagcacccactatcccgag
ctcggcgccttgtccgggctgctcggcggccggtcggcgatcctggacggcgaggtcgtg
gcgctggagcccggcgatcggccctcgttcgcccggctcgccggccgcatgcatgtcgcc
cggcccaccgagacgctgctggcgaccgtgcccgtcgtctactacgtgttcgacctgctg
tggttcgagggtcacgacctgctcgaccagccgtacggaacccgccgccggttgctcgcc
gatctcgggctcaccggcggcaccatccgcctgcccccgcacttcaccgatgtcgcgggc
gggaccgtcctgcgggcggccgagctgggcggtctcgaaggggtcgtcgcgaaacggctg
gactcggtgtaccggcccgggcggcgttccgacacgtggacgaaggtgccgctcatccgt
acccaggaggtcgtggtcctggggtggaaggcgggcgcgggccgccgggccggcaccatc
gggtcgctgctgctcggggtcctcgacgacgacggcgcgctccggttcgcggggcatgtc
ggcaccggcttcaccgacgtcatgctgcgccggctccaggagcagctcaccccattggaa
cgccgcacaccaccggcccccgacgtgccccgcgagcaggcccggcacgcccactgggtg
gagcccgcgctggtcggcgaggtggcctatcgcacctggacccccgagggccggttgcgg
cacgcatcctggcgcggcctgcgcaccgaccgccaccccgccgaggcccgccggtggccc
gcgcccccgccaccggcgctgcccgaggtggagaaggccctggtgaccccggacggccgc
tggcgcgtcgagatcgtccgcggcgccacgcactaccgcctggcccacggcgacaacatc
atcgacggcctcgacctggccggggtgcagcgcctgctcacccgcgccggcgtcgacttc
gccgacctgatcgaaccgggcagcaatcactcggcagcctag

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