Actinobaculum sp. 313: DDD63_05005
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Entry
DDD63_05005 CDS
T05430
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
actt
Actinobaculum sp. 313
Brite
KEGG Orthology (KO) [BR:
actt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
actt03019
]
DDD63_05005 (rnc)
03009 Ribosome biogenesis [BR:
actt03009
]
DDD63_05005 (rnc)
03036 Chromosome and associated proteins [BR:
actt03036
]
DDD63_05005 (rnc)
Enzymes [BR:
actt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
DDD63_05005 (rnc)
Messenger RNA biogenesis [BR:
actt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DDD63_05005 (rnc)
Ribosome biogenesis [BR:
actt03009
]
Eukaryotic type
90S particles
RNase
DDD63_05005 (rnc)
Prokaryotic type
rRNA processing factors
DDD63_05005 (rnc)
Chromosome and associated proteins [BR:
actt03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
DDD63_05005 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
AWE42216
LinkDB
All DBs
Position
1163986..1164666
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AA seq
226 aa
AA seq
DB search
MSYHDLVDRWGIDIARPLLRLALTHRSFAYEHDEEHNERLEFLGDSVLGMIVADMVFREF
PDASEGDMSRMKTHAVSEKGLADIAHRLGIGEFIRLGRGEKQSGGAQKDSILSDTVEALI
GATYLQHGLEPTRRIVEGLTAERIAEASTLGPSLDWQTSFEEIAHQRGMVGTLKFDVTSE
GPDHQRVFTAVAYMGDRQWGTGTGSSQKNARHKAAEASYKMITADA
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgagctaccacgacttggttgatagatggggcatcgatatcgcgcgaccgttgttacgc
ctggcgctgacgcatcgcagcttcgcctatgaacacgacgaagaacacaacgaacgcctc
gagttcctgggtgactccgtgctgggcatgatcgtcgcagatatggttttccgcgagttt
ccagacgccagcgagggtgacatgtcgcgtatgaaaacgcatgcggtctccgagaagggc
ctggctgatatcgctcatcgacttgggattggagagttcatccggctcgggcgcggtgag
aagcaaagcgggggagcgcagaaggactccatcctctcggacactgtggaggcgctcatc
ggtgccacttacctgcaacacggtctggaaccgacgcgaaggatcgtggaggggttgacc
gctgagagaatcgccgaggcaagtacgctcggaccgagcctggactggcagacgagtttt
gaggagatcgcgcatcaacgcggcatggtcggaacactcaagttcgatgtcaccagcgag
ggccccgatcatcagcgcgtattcaccgccgtcgcgtacatgggagataggcagtggggt
acgggtaccggctcaagccagaagaacgcgcggcataaggccgccgaagcgtcctacaag
atgatcacggcggatgcctga
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