Athene cunicularia (burrowing owl): 113477882
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Entry
113477882 CDS
T05777
Symbol
PRKN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun04120
Ubiquitin mediated proteolysis
acun04137
Mitophagy - animal
acun04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113477882 (PRKN)
04120 Ubiquitin mediated proteolysis
113477882 (PRKN)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113477882 (PRKN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acun04131
]
113477882 (PRKN)
04121 Ubiquitin system [BR:
acun04121
]
113477882 (PRKN)
03029 Mitochondrial biogenesis [BR:
acun03029
]
113477882 (PRKN)
Enzymes [BR:
acun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
113477882 (PRKN)
Membrane trafficking [BR:
acun04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
113477882 (PRKN)
Aggrephagy
Other aggrephagy associated proteins
113477882 (PRKN)
Xenophagy
Other xenophagy associated proteins
113477882 (PRKN)
Ubiquitin system [BR:
acun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
113477882 (PRKN)
Mitochondrial biogenesis [BR:
acun03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
113477882 (PRKN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR
Rad60-SLD
Dsc3_N
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
113477882
NCBI-ProteinID:
XP_026700364
LinkDB
All DBs
Position
3
AA seq
490 aa
AA seq
DB search
MQMIISDTGTDCSWTSFWKDVKTRQILSVFVRFNSSHGFPVEIGSDASILQLKEVVAQRQ
GIPADQLRVIFAGRELSNDLTLQNCDLAQQSIVHIVQSPQKNSQNKDETEDNGAGGILKA
LDREPESLTRIDLSTSILPSLSTGLAVILDPTKASISLPSEKSGADSYNSFYVFCKNFCQ
AVKPGKLRVRCSACKQGTLTLARGPSCWDDVLIPNRLRGVCQSQTCNGNTAEFFFKCGAH
PTTDSETSVALNLVTTNSRCITCITCTDIRSPVLVFQCVHRHVICLDCFHLYCVTMLNDR
QFIHDPQLGYSLPCVAGCPDSLIKELHHFRILGEEQYNRYQRYGAEECVLQMGGVLCPTP
SCGAGLLPEPGVRKIVCEPGNGVGCGFVFCRECKEEYHEGECISLLSMQGAMAQKGYVVD
EHAAMQARWEEASRETIKKTTKPCPSCNIPVEKNGGCMHMKCPRPQCRFEWCWNCGLEWN
RTCMGDHWFD
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgataattagtgatactgggacagactgcagctggacatcattttggaaggat
gtaaaaacaaggcagatactcagtgtgtttgtcaggttcaactccagccatggcttcccg
gtggagattggttcagatgccagcatcctccagctgaaggaggtggttgcccagcgacag
ggaattccagctgaccagctgcgggtgatttttgcagggagggagctcagcaatgacttg
acactgcagaactgtgacctggcccagcagagtatcgttcatattgttcagagtccacag
aagaacagtcagaacaaggatgagacagaagataacggtgctggaggtattctaaaagcc
ttggacagagaacctgaaagtctaactcgcatagatctcagtaccagcatcctaccatca
ctctctacagggttggctgttattctggatcctacaaaagccagcatttctctcccctct
gaaaaatcaggcgctgatagttacaacagtttttatgttttctgcaaaaatttctgtcaa
gctgtgaaacctgggaaactgagggtccgctgcagtgcatgtaaacaaggaacactgaca
ttggcaaggggtccatcttgctgggatgatgtgctgattcccaacagattaagaggtgtt
tgccagtcccaaacgtgcaatggaaacacagcggagtttttctttaaatgtggagcacac
ccaaccactgacagtgaaacatctgtggctttgaacctcgttacaacaaacagtcgctgt
atcacatgtataacatgcacagatattaggagtcctgtgcttgtgttccagtgcgtgcat
cgccatgtcatttgcctagactgcttccatttgtactgtgtgactatgctgaatgaccgt
cagttcatccatgacccgcagcttggctattccctcccttgtgtagctggctgtccagac
tccttgattaaagagcttcatcacttcaggattctgggagaagaacagtataaccgctac
cagcgctacggggccgaggagtgcgtgctgcagatgggaggagtgctgtgtccaactccc
agctgtggagcaggtttgcttcctgaaccaggagtgaggaaaattgtatgtgaaccaggc
aacggagtaggctgtgggtttgtgttctgccgtgaatgtaaagaagaataccatgaaggg
gaatgcatctctctcctcagcatgcagggagccatggcccagaagggatatgtagttgat
gaacatgcagccatgcaagctcgatgggaagaggcatctagagaaacaatcaagaagaca
accaagccatgccccagctgcaatattccagtagaaaaaaatggtggctgcatgcacatg
aaatgtcctcgccctcagtgcagatttgagtggtgctggaactgtggcctggagtggaac
agaacctgcatgggagatcactggtttgactag
DBGET
integrated database retrieval system
