Athene cunicularia (burrowing owl): 113480156
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Entry
113480156 CDS
T05777
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113480156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acun03019
]
113480156
Messenger RNA biogenesis [BR:
acun03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113480156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
113480156
NCBI-ProteinID:
XP_026704577
LinkDB
All DBs
Position
4
AA seq
564 aa
AA seq
DB search
MRISGVDSHYTSGVLGNSCLIPIPVATEHWLYGDDTTGKQEDGPISGHAESSHPLQDAPQ
ENRPVSNEDREMSQHALPSGEDDEDDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLK
TGRGYGASASAKLQPKGIDLDAAGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFN
EETWKAYCEKQRRLQLGLDPAPPISTENKITVQQGRTGNAEKEVENNIIKTEFKTDFLAL
VGGRMKAGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGSKPQPP
QQPQQPSQPQQPPQQQPFAPPAGPPPPPLAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPG
PIPGLFPPPLAPPPALLIPTLDGQPASYNNRQPPPFGYNSADSGFISYPPISTSHTPWVT
TVDKGTSSSSSSHWEYSGSRRERERERERERERERDRDRTPTTSEYNNDDERYRYYSRER
SYDFERDYRRSRDRSREREDRHRERRHRDKEESSKHKSSRRKQHESEEGESHRRHKHKKN
KRSKEEKEASEDGAQEGEEQDAKE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaggatctcgggggttgactctcactatacttcaggggtcctggggaacagttgtcta
attcctattccagttgccacggagcactggctctacggggatgacaccactggtaagcaa
gaagatggaccaatttctggacatgcagaatcttctcatcctttgcaagatgctcctcag
gagaaccggcctgtcagcaatgaagaccgagagatgtcacaacacgcccttccaagtggt
gaagatgatgaagatgacagtgatagcgacagtgatgacgatgatgtgaaagttactatt
ggcaacattaaaacaggagcaccatcatacatgggaactcctatgaatctaaacttaaaa
acgggtagaggctatggagcatctgcttcagccaagctgcagcccaaaggtattgactta
gatgctgcagggaatataaatggattgcctgttattgaagtggatttagattcatttgaa
gataagccgtggaggaaaccaggtgctgatctttctgattactttaattatggattcaat
gaagaaacatggaaagcttattgtgaaaagcagcgacggcttcagcttgggctggatcct
gctcctcccatcagcactgaaaataagatcacggttcagcaaggaagaacaggaaatgct
gaaaaagaagtggaaaacaacataatcaaaacagaattcaaaacagacttcttggctctg
gtgggaggacgcatgaaggctgggccacctcctaataggaagctgggtgggacaattgat
gtgattggtggccaggcaggcacaattcggagagtagaaggaagacgacgtgataagcat
gcctccgaggaaaacccaatccaggtccttggagaccatggaagtaagccacaaccccca
cagcagccccagcagccatcacagccccaacagccacctcagcaacagccgtttgcacca
ccagcaggcccaccgcctcccccgctcgctgggccacctccaccacacttcctccaccct
cctccacccgttacttctgttccacctcccctgcatcctccaggtctaccgccacccggt
cctattccagggttgttcccgcctcctctggcaccaccaccagcgctcctcattccaacc
ttggatggccaaccagccagctacaataacaggcagcctcctccatttggttacaactct
gcagattcaggtttcatcagctacccacccatctccacatcccacacaccctgggtgacg
acagtggacaaaggcacaagcagttccagcagcagccattgggaatactccggctcgaga
cgtgagagggagcgtgagcgggaacgggagagggagagggagagggacagagaccgcact
cctaccactagcgaatacaacaatgatgatgaacgataccgctactacagccgagagcgc
agctatgactttgagcgtgactaccgccggagtcgagatcgcagcagggagcgagaagat
cgtcaccgagagcgcaggcacagagacaaagaggagagcagcaagcataagtcttcaaga
cgcaagcaacatgagagtgaggaaggggagagtcatcggcgtcacaagcacaaaaagaac
aagcgtagcaaagaggagaaggaggccagtgaagatggcgcccaggagggagaggagcag
gatgccaaggagtga
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