KEGG   Athene cunicularia (burrowing owl): 113483836Help
Entry
113483836         CDS       T05777                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
acun  Athene cunicularia (burrowing owl)
Pathway
acun03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:acun00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    113483836 (LIG4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acun03400]
    113483836 (LIG4)
Enzymes [BR:acun01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     113483836 (LIG4)
DNA repair and recombination proteins [BR:acun03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     113483836 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DNA_ligase_IV BRCT BRCT_2 RNA_ligase Tox-REase-9 mRNA_cap_enzyme DUF2948
Motif
Other DBs
NCBI-GeneID: 113483836
NCBI-ProteinID: XP_026711591
LinkDB All DBs
Position
1
AA seq 912 aa AA seqDB search
MASTPASQPPPKKTVASHVPFADLCSTLERIQTCKSRPEKIKYFREFLDSWRKFHDALHK
NEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAAKLLNYRTP
SGSRGDAGDFAMIAYFVLKPRSPKQGRLTIEQVNEHLDVIANNNAAKNKGLLKKSLLQLI
TQSTALEQKWLIRMIIKDLRLGVSQQTIFSIFHPDAVELHNVTTDLEKVCRQLHDPSVSL
SDVSIMLFSAFKPMLAAIADVQQIEKQMNYQIFYIETKLDGERMQMHKDGDVYKYFSRNG
FDYTQQFGASPLDGSLTPFIHNVFKSNIQNCILDGEMMAYNPETQTFMQKGNRFDIKRMV
EDSDLQTCFCVFDVLMVNNQKLGHEVLSKRYEILSSVFTPITGRIHVVRKKSASTRKEVI
DALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGS
RGGMMSHFLCAIAETPPPNEKPTVFHSICRVGSGYTMKELYDLGLKLAKHWKPYHRKDPP
CNILCGTEKPEMYIEPCNSVVVQIKAAEIVNSDMYKTDCTLRFPRIEKIREDKEWYECMT
SDMLEDLRSKAEGKLASKHLHIDEYDEPQEKKRKTVSKVKKVIGIAEQFKAPDLSSVNKV
SNIFEDVEFCVMTGTGKCSKSELESRIAECGGSVVQNPGPETYCVIVGAENVRVKNIIAS
NKYDVVRAEWLLQCFQTKMLVPWQPSFMIHMCPDTKEHFAREYDCYGDSYMTDTDVAQLK
DVFSRMKDHKVMPLDMIAEVEERYSWNSCHLSIFRGNTIYVDCYNVVNEPRTKIHGTMLS
IRALELRFYGAKVVSHLEEGVSHVVIGEDHSRVKQMKALRRTFGKKFKIVSELWVTQSVE
EGVAKNESQYLI
NT seq 2739 nt NT seq  +upstreamnt  +downstreamnt
atggcttccacaccagcttcccagcctcctcctaaaaaaactgtcgcctctcacgtgcct
tttgcagatctgtgttctactctggagcgaatacagacatgtaaatctcgtccggagaaa
atcaagtatttcagggagtttctggattcctggagaaaattccatgatgctcttcataaa
aatgagaaagatgtcacagattctttttatccagctatgcgacttattcttccacagttg
gaaagagaaaggatggcatacggaattaaagaaactatgcttgcaaaactgtatattgaa
ctgcttaatttaccaaaagatggaaaagatgctgcaaagcttttaaattacagaacccct
tctggctcacgtggagatgctggagattttgcaatgattgcatactttgtgttaaaacct
aggagcccaaaacaaggcagactgacaatagaacaagtcaatgaacacttagatgtgata
gctaataataatgctgctaaaaacaaggggctattaaagaaaagtcttcttcagttaatt
acccagagcacagcactggaacaaaagtggctcatcaggatgattataaaggatctaagg
cttggtgttagtcaacagactatattttccatttttcaccctgatgctgttgaattacac
aatgtcacaactgatttggaaaaagtttgtagacaactgcatgatccctcagtctccctt
agtgatgtttctatcatgttattttctgcctttaaaccaatgcttgctgctattgctgat
gtccagcaaattgagaaacaaatgaattaccagatattctacatagagactaagctggat
ggtgaacgtatgcagatgcacaaagatggagatgtgtataaatatttttcccgaaatggg
tttgactatactcagcagtttggtgcttccccgcttgatggttcattaacaccatttatt
cataatgtatttaaaagcaatatacaaaattgcattctcgatggtgaaatgatggcttac
aatcctgagacacaaacctttatgcaaaaaggaaacagatttgacataaaaagaatggta
gaggattctgatctgcagacttgcttctgtgtgtttgatgtattgatggttaacaatcag
aagttggggcacgaagtactaagcaaaagatatgaaatcttaagtagtgtatttacccca
ataactggcaggatacatgttgtacgtaaaaaaagtgccagcacaagaaaagaagtaatt
gatgctttaaatgaagcaatagataacagagaggaaggaattatggtgaaagatcccatg
tccacatacaagcctgacaaacgtggagaaggctggttaaaaatcaagccggaatatgtc
aatgggctgatggatgaactagaccttttaattgttggtggttactgggggaagggctca
cgtggtggaatgatgtctcattttctgtgtgctattgcagagacaccccctccaaacgaa
aaacctactgttttccactctatttgtcgtgttggttctggctatactatgaaggaattg
tatgatctaggtttgaaactggctaagcactggaaaccctaccataggaaggaccctccc
tgtaacattttgtgtggaactgaaaaacctgaaatgtacattgagccttgcaactctgtc
gttgttcagatcaaggcagccgagattgttaacagtgatatgtacaaaactgactgtact
ttgagattcccccgaattgagaagataagagaggacaaagaatggtacgagtgtatgact
tcagacatgttagaagatctcagaagcaaagcagaagggaagctggcatctaagcacctt
catatagatgagtatgatgagcctcaagagaaaaaaaggaaaactgtatcaaaggtgaag
aaggtaattggaatagctgagcaatttaaagctcctgatctttctagtgtaaacaaggtt
tcaaatatatttgaagatgttgaattttgtgttatgacaggaacaggaaagtgctcaaag
tctgagctggaaagcagaatagctgaatgtggtggtagtgtggtacagaacccagggcca
gagacttactgtgtcattgtaggagctgagaatgtcagagtgaaaaacatcattgcctcc
aacaaatacgatgtggtgagggcagagtggctccttcagtgttttcaaaccaaaatgctg
gtgccttggcagccatcctttatgattcacatgtgtcctgacacaaaagaacattttgct
cgtgagtatgattgttatggagacagctacatgacagacacagatgttgcacaactcaag
gacgtgttctcaagaatgaaagaccataaggtgatgcccttggacatgatagcagaggta
gaagaacgttattcatggaacagctgtcatctcagtatattcagaggaaacactatttat
gtggactgttacaatgttgttaacgagccaagaaccaaaatccatggaacgatgctatca
attagagctttggagctccgtttttatggtgcaaaagtggtctctcaccttgaagagggt
gtctctcatgttgttataggggaagatcattcccgggtaaaacagatgaaagcactcagg
agaacatttgggaaaaaatttaaaatcgtatctgagctgtgggtaacgcagtcagtggag
gaaggagttgcaaagaatgaaagtcagtacttaatttaa

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