KEGG   Anser cygnoides domesticus (swan goose): 106042474
Entry
106042474         CDS       T04896                                 
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
acyg  Anser cygnoides domesticus (swan goose)
Pathway
acyg04115  p53 signaling pathway
acyg04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:acyg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106042474 (COP1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    106042474 (COP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:acyg04121]
    106042474 (COP1)
Enzymes [BR:acyg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106042474 (COP1)
Ubiquitin system [BR:acyg04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106042474 (COP1)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     106042474 (COP1)
SSDB
Motif
Pfam: WD40 zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_5 zf-RING_UBOX zf-rbx1 zf-C3HC4_3 WD40_like zf-C3HC4_4 zf-RING_4 zf_C2H2_10 zf-RING_10 Prok-RING_4 DZR TRAF3_RING
Other DBs
NCBI-GeneID: 106042474
NCBI-ProteinID: XP_047929295
LinkDB
Position
Unknown
AA seq 590 aa
MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRSE
EKRFKLDHSVSSTNGHRWQIIQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQL
QILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPS
HSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMTRVSD
DSRTTSQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV
TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF
TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCV
KFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQ
LKLWNVGKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFD
TVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgattgaagaagcctacatgacgaaatgtggacacagcttctgctataaatgtattcac
cagagcttggaagacaataacagatgtcccaaatgtaactatgttgtggacaacatagat
catctttatcccaacttcttagtcaatgaactgattcttaaacaaaaacagagatctgag
gagaaaagattcaaactggaccattcagtgagtagcaccaatggccataggtggcagata
attcaagatttgttgggaactgatcaagacaatcttgacttggctaatgtcaacctgatg
ctggagctgctggtgcaaaaaaagaagcagttggaagcagagtcccatgctgcccaattg
cagatcctcatggaatttctcaaagttgccagaagaaataaacgagagcaattggagcag
atccagaaggagctaagtgttctggaagaagatattaaacgagtagaggaaatgagtggc
ttgtattccccagtcagtgaggacagtacagtgccacagtttgaagctccttcaccttcg
cacagtagtattattgactccacggagtacagccagcctccaggcttcagtggcagttct
cagaccaaaaagcagccctggtataacagcacgctagcctcacgacggaagcggctcacg
gctcactttgaggacctagagcagtgctatttttccacaaggatgacacgtgtctcagat
gacagcagaaccacaagccagctggatgagtttcaggagtgtctatccaagttcacacgc
tacaattctgtccgccccctggcaacgctgtcctacgctagtgacctctacaatggctcc
agcatagtctccagtattgagtttgaccgggactgtgactactttgccatcgctggggta
acaaagaagattaaagtctatgagtatggtacagtcattcaggatgcagtggatattcac
taccctgagaatgaaatgacctgtaattccaaaatcagctgtatcagctggagtagttac
cacaagaacctgctagccagcagcgactatgaaggcaccgtcatcctgtgggatgggttc
acaggacaaagatccaaggtctaccaggaacatgagaaaaggtgctggagcgttgacttt
aacttgatggacccaaaactattggcttcaggctctgatgatgcaaaagtgaagctgtgg
tctaccaacttggacaattcagtagcaagcatcgaggccaaggcgaatgtgtgctgtgtc
aaattcagcccctcttctaggtatcacctagcttttggctgtgcagatcactgtgtccac
tactacgacctccgcaacactaagcagcccatcatggtgttcaaagggcatcgcaaggca
gtctcctatgcaaaatttgtgagtggggaagaaattgtctccgcgtcaacagacagtcag
ctgaagctctggaatgtagggaaacctcactgtttgcgctccttcaagggtcacatcaac
gagaagaattttgtagggctggcgtccaacggagactacattgcctgtggaagcgaaaat
aattccctttacctatactataagggcctctcaaagacactgctgacgttcaagtttgat
acggtcaagagcgtcctggacaaggacaggaaagaagatgacacaaatgagtttgtgagt
gctgtctgctggagggcgcttccagatggggagtccaacgtgctgattgctgctaacagt
cagggtacaattaaggtactggagctggtatga

DBGET integrated database retrieval system