Anser cygnoides domesticus (swan goose): 106042474
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Entry
106042474 CDS
T04896
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
acyg
Anser cygnoides domesticus (swan goose)
Pathway
acyg04115
p53 signaling pathway
acyg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106042474 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
106042474 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acyg04121
]
106042474 (COP1)
Enzymes [BR:
acyg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106042474 (COP1)
Ubiquitin system [BR:
acyg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106042474 (COP1)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
106042474 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
WD40_like
zf-C3HC4_4
zf-RING_4
zf_C2H2_10
zf-RING_10
Prok-RING_4
DZR
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
106042474
NCBI-ProteinID:
XP_047929295
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRSE
EKRFKLDHSVSSTNGHRWQIIQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQL
QILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPS
HSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMTRVSD
DSRTTSQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV
TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF
TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCV
KFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQ
LKLWNVGKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFD
TVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagaagcctacatgacgaaatgtggacacagcttctgctataaatgtattcac
cagagcttggaagacaataacagatgtcccaaatgtaactatgttgtggacaacatagat
catctttatcccaacttcttagtcaatgaactgattcttaaacaaaaacagagatctgag
gagaaaagattcaaactggaccattcagtgagtagcaccaatggccataggtggcagata
attcaagatttgttgggaactgatcaagacaatcttgacttggctaatgtcaacctgatg
ctggagctgctggtgcaaaaaaagaagcagttggaagcagagtcccatgctgcccaattg
cagatcctcatggaatttctcaaagttgccagaagaaataaacgagagcaattggagcag
atccagaaggagctaagtgttctggaagaagatattaaacgagtagaggaaatgagtggc
ttgtattccccagtcagtgaggacagtacagtgccacagtttgaagctccttcaccttcg
cacagtagtattattgactccacggagtacagccagcctccaggcttcagtggcagttct
cagaccaaaaagcagccctggtataacagcacgctagcctcacgacggaagcggctcacg
gctcactttgaggacctagagcagtgctatttttccacaaggatgacacgtgtctcagat
gacagcagaaccacaagccagctggatgagtttcaggagtgtctatccaagttcacacgc
tacaattctgtccgccccctggcaacgctgtcctacgctagtgacctctacaatggctcc
agcatagtctccagtattgagtttgaccgggactgtgactactttgccatcgctggggta
acaaagaagattaaagtctatgagtatggtacagtcattcaggatgcagtggatattcac
taccctgagaatgaaatgacctgtaattccaaaatcagctgtatcagctggagtagttac
cacaagaacctgctagccagcagcgactatgaaggcaccgtcatcctgtgggatgggttc
acaggacaaagatccaaggtctaccaggaacatgagaaaaggtgctggagcgttgacttt
aacttgatggacccaaaactattggcttcaggctctgatgatgcaaaagtgaagctgtgg
tctaccaacttggacaattcagtagcaagcatcgaggccaaggcgaatgtgtgctgtgtc
aaattcagcccctcttctaggtatcacctagcttttggctgtgcagatcactgtgtccac
tactacgacctccgcaacactaagcagcccatcatggtgttcaaagggcatcgcaaggca
gtctcctatgcaaaatttgtgagtggggaagaaattgtctccgcgtcaacagacagtcag
ctgaagctctggaatgtagggaaacctcactgtttgcgctccttcaagggtcacatcaac
gagaagaattttgtagggctggcgtccaacggagactacattgcctgtggaagcgaaaat
aattccctttacctatactataagggcctctcaaagacactgctgacgttcaagtttgat
acggtcaagagcgtcctggacaaggacaggaaagaagatgacacaaatgagtttgtgagt
gctgtctgctggagggcgcttccagatggggagtccaacgtgctgattgctgctaacagt
cagggtacaattaaggtactggagctggtatga
DBGET
integrated database retrieval system